Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  392 bits (1007), Expect = e-113
 Identities = 215/558 (38%), Positives = 314/558 (56%), Gaps = 35/558 (6%)

Query: 15  RARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEP 74
           + RQ  +  T  L NLIPPTVSY + G+ LIIGP  L     + L++M    +L+ +   
Sbjct: 16  QVRQQVLGQTQILQNLIPPTVSYTTEGNVLIIGPEDLARLAADKLANMGQRAILANESIT 75

Query: 75  GTQSN-------------LYYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIV 121
               +              YY   +EI GFLG F V VE+     +L+  AI    FD++
Sbjct: 76  SQDEDHLEKVMNAAEDVESYYNKLIEIKGFLGQFQVKVEHDNGTADLSLVAIRKAHFDLI 135

Query: 122 LDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSSR 181
           LD+S    ++ E+  PGYF VG+   KL DA+ ++P L+G FDKP+Y +++ D+CAH   
Sbjct: 136 LDLSQAPCINLEMLPPGYFYVGQDEAKLTDAIAQLPELIGEFDKPRYVKVNSDICAHHRN 195

Query: 182 GVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTD 241
           G+ GC RC++ CPA A++S       H+I+I+PYLC G G+C  ACPT AI Y LP P  
Sbjct: 196 GIDGCSRCLNFCPADAIAS-----VDHKIEIDPYLCHGAGSCTNACPTGAISYDLPTPQA 250

Query: 242 TQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMAL--KVLPDNVIPVVVEELPSVGID 299
              ++ +L+  +  A    P++L     H++    +L    LP  ++PV +EE+    +D
Sbjct: 251 LHSYLNKLVTRFRSAAQTAPVILF----HDASLGASLIGDELPGAILPVELEEITVASMD 306

Query: 300 SWFAALVNGATQVLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKET--IDILYLESL 357
            W AAL  GA Q+L   +    PT+ ++LN E+ +A  +L  +G P+    I+   +  L
Sbjct: 307 HWMAALAWGARQILVLNTEATAPTLTQMLNGELKLANEILDEMGQPQRVSVIEAKQIADL 366

Query: 358 REGMPVLCEQPLGLKLGDLIGNKRERLFTALDALAETLNAQPSVQPLSISA---PYGTIE 414
              +      P+ +        KRE L+ A+D L    N+Q +     +S    PYG + 
Sbjct: 367 ATLIEPSASWPMIVPGEFAATTKRETLYEAIDHL----NSQAASTDACLSKSNIPYGKVS 422

Query: 415 CQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNW 474
             T +CTLC+SCV+ CPT+AL   G+ PAL F+EQ CVQCGLC  ACPE+V+S TPQ+N+
Sbjct: 423 VNTDNCTLCLSCVSTCPTQALTDGGEKPALYFVEQACVQCGLCESACPEKVISLTPQINF 482

Query: 475 NKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDC 534
           +  ARQ   TL++E P +C+RC  PFA QSM+  +   + GHS F+      R+ MC DC
Sbjct: 483 DATARQSRQTLNEEAPFECIRCGTPFATQSMVQRMLDVVGGHSAFSA--NTERLKMCSDC 540

Query: 535 RVVDMFEAMAHDPEQQLK 552
           RV DMFE +  DPE+QL+
Sbjct: 541 RVKDMFEDILQDPEKQLR 558