Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Probable NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I) from Mycobacterium tuberculosis H37Rv

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 11/59 (18%)

Query: 185 GCERCVDACPAGALSSEGSEQT-----------GHRIQINPYLCQGVGTCATACPTEAI 232
           GCE C  ACPA A+  EG++ T           G   QIN   C G G C  ACPT A+
Sbjct: 83  GCELCAWACPADAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEACPTRAL 141



 Score = 37.4 bits (85), Expect = 5e-07
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 14/64 (21%)

Query: 420 CTLCMSCVAVCPTRALHLAGD--------SPALRF--IEQ----DCVQCGLCVKACPEQV 465
           C  C  C   CP  A+++ G         SP  R+  + Q     C+ CGLC++ACP + 
Sbjct: 81  CIGCELCAWACPADAIYVEGADNTEEERFSPGERYGRVYQINYLRCIGCGLCIEACPTRA 140

Query: 466 LSAT 469
           L+ T
Sbjct: 141 LTMT 144



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 209 RIQINPY-----LCQGVGTCATACPTEAIHYALPNPTDTQKF 245
           R Q+N Y      C G   CA ACP +AI+    + T+ ++F
Sbjct: 68  RHQLNRYPDGLEKCIGCELCAWACPADAIYVEGADNTEEERF 109



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 6/37 (16%)

Query: 420 CTLCMSCVAVCPTRAL------HLAGDSPALRFIEQD 450
           C  C  C+  CPTRAL       LA D+ A    E+D
Sbjct: 126 CIGCGLCIEACPTRALTMTYDYELADDNRADLIYEKD 162



 Score = 24.6 bits (52), Expect = 0.004
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 449 QDCVQCGLCVKACPEQVL-----SATPQLNWNKAARQGVVTLHQEEPAKCLRC 496
           + C+ C LC  ACP   +       T +  ++   R G V  +Q    +C+ C
Sbjct: 79  EKCIGCELCAWACPADAIYVEGADNTEEERFSPGERYGRV--YQINYLRCIGC 129



 Score = 24.6 bits (52), Expect = 0.004
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 185 GCERCVDACPAGALS 199
           GC  C++ACP  AL+
Sbjct: 128 GCGLCIEACPTRALT 142