Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 413 IECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSAT 469
           IE     C LC  C+ VCP  A+  + + P +  I+  CV C  CV+ CP   +  T
Sbjct: 31  IEINPEICILCNRCLEVCPVTAI--SSNFPEVPDIDNKCVYCNTCVETCPVDAIKIT 85



 Score = 37.0 bits (84), Expect = 5e-07
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 25/112 (22%)

Query: 405 SISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGD----------------SPALRFIE 448
           +IS+ +  +    + C  C +CV  CP  A+ +                   S  L +  
Sbjct: 52  AISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNR 111

Query: 449 QDCVQCGLCVKACPEQVLSA---TPQLNWNKAARQGVVTLHQEE--PAKCLR 495
           + CV C +C K CP + +S    T   N +K    G    H EE  PAK ++
Sbjct: 112 KKCVMCLVCTKNCPFEAISESDDTISFNMDKCVLCG----HCEEICPAKAIK 159



 Score = 32.7 bits (73), Expect = 1e-05
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 171 LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTE 230
           ++P++C         C RC++ CP  A+SS   E     +      C    TC   CP +
Sbjct: 33  INPEICIL-------CNRCLEVCPVTAISSNFPE-----VPDIDNKCVYCNTCVETCPVD 80

Query: 231 AI 232
           AI
Sbjct: 81  AI 82



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 203 SEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTD 241
           S+   ++I+INP +C     C   CP  AI    P   D
Sbjct: 24  SQYISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPD 62



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 405 SISAPYGTIECQTSDCTLCMSCVAVCPTRALHL 437
           +IS    TI      C LC  C  +CP +A+ L
Sbjct: 128 AISESDDTISFNMDKCVLCGHCEEICPAKAIKL 160



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 186 CERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232
           C  C   CP  A+S   S+ T   I  N   C   G C   CP +AI
Sbjct: 117 CLVCTKNCPFEAISE--SDDT---ISFNMDKCVLCGHCEEICPAKAI 158