Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 413 IECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSAT 469
           IE     C LC  C+ VCP  A+  + + P +  I+  CV C  CV+ CP   +  T
Sbjct: 31  IEINPELCILCNRCLEVCPVTAI--SSNFPEVPDIDNKCVYCNTCVETCPVDAIKIT 85



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 19/109 (17%)

Query: 405 SISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAG----------------DSPALRFIE 448
           +IS+ +  +    + C  C +CV  CP  A+ +                   S  L +  
Sbjct: 52  AISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNR 111

Query: 449 QDCVQCGLCVKACPEQVLSATPQLNWNKAARQGVVTLHQEE--PAKCLR 495
           + CV C +C K CP   +S +   N +    + V+  H EE  PAK ++
Sbjct: 112 KKCVMCLVCTKNCPFGAISESDD-NISFDMDKCVLCGHCEEICPAKAIK 159



 Score = 33.5 bits (75), Expect = 6e-06
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 171 LDPDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTE 230
           ++P+LC         C RC++ CP  A+SS   E     +      C    TC   CP +
Sbjct: 33  INPELCIL-------CNRCLEVCPVTAISSNFPE-----VPDIDNKCVYCNTCVETCPVD 80

Query: 231 AI 232
           AI
Sbjct: 81  AI 82



 Score = 30.4 bits (67), Expect = 5e-05
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 203 SEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTD 241
           S+   ++I+INP LC     C   CP  AI    P   D
Sbjct: 24  SQYISNKIEINPELCILCNRCLEVCPVTAISSNFPEVPD 62



 Score = 26.6 bits (57), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 405 SISAPYGTIECQTSDCTLCMSCVAVCPTRALHL 437
           +IS     I      C LC  C  +CP +A+ L
Sbjct: 128 AISESDDNISFDMDKCVLCGHCEEICPAKAIKL 160