Pairwise Alignments
Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 60.8 bits (146), Expect = 9e-14
Identities = 80/335 (23%), Positives = 120/335 (35%), Gaps = 47/335 (14%)
Query: 140 FPVGRGYPKLADAL-----EEIPTLMGTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACP 194
FP +G+ L + EI +L G +KPK + P ++ C CV CP
Sbjct: 84 FPYSKGHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECP 143
Query: 195 AGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIERLLANYH 254
A+S E I+ C C+ CP AI A P QK I+ N
Sbjct: 144 VDAISIEDI------AVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEE 197
Query: 255 QAGGEKPIVLICSSRHESYNVMALKVLPDNVIP---VVVEELPSVGIDSWFAALVNGATQ 311
+ G + V C YN AL V P + VE P I + +
Sbjct: 198 ECIGCEKCVEACPGSMIEYNGEALGVKLPGACPACGLCVESCPVEVI----------SLE 247
Query: 312 VLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKETIDILYLESLREGMPVLCEQPLGL 371
V +A+++ P T + ++ E A + P I ++ P GL
Sbjct: 248 VEYASAK--PVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVV--------------NPKGL 291
Query: 372 KLGDLIGNKRERLFT-----ALDALAETLNAQPSVQPLSISAPYGTIECQTSDCTLCMSC 426
+L ++ F A+ A + + Y +E + C C C
Sbjct: 292 ELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGEC 351
Query: 427 VAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKAC 461
V VCP + L L GD ++ CV C C++AC
Sbjct: 352 VDVCPQKTLELTGDDKMP--LKGYCVMCLKCIEAC 384
Score = 46.6 bits (109), Expect = 2e-09
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 419 DCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAA 478
+C C CV CP + G++ ++ + C CGLCV++CP +V+S + K
Sbjct: 198 ECIGCEKCVEACPGSMIEYNGEALGVK-LPGACPACGLCVESCPVEVISLEVEYASAKPV 256
Query: 479 RQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDC 534
+ +E+ A C C P I ++ K E N AMC C
Sbjct: 257 TDEGLVWSEEKCAYCGPCAIK-CPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRC 311
Score = 43.9 bits (102), Expect = 1e-08
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 420 CTLCMSCVAVCPTRALHLAG--DSPALRFI--------EQDCVQCGLCVKACPEQVLS 467
C LC CV +CP + L G + P I +DCV CG+CV CP +S
Sbjct: 91 CVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAIS 148
Score = 42.7 bits (99), Expect = 3e-08
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 417 TSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQD-CVQCGLCVKACPEQVLSATPQLNWN 475
T DC C CV CP A+ + + I+ D C+ C +C + CP + +L
Sbjct: 129 TKDCVACGVCVPECPVDAISIED----IAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQK 184
Query: 476 KAARQGVVTLHQEEPAKCLRCHKPFAPQSMI 506
+ T+++EE C +C + P SMI
Sbjct: 185 RQKTIKSFTVNEEECIGCEKCVEA-CPGSMI 214
Score = 38.5 bits (88), Expect = 5e-07
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 420 CTLCMSCVAVCPTRAL------HLAGDSPALRFIEQDCVQCGLCVKACPEQVLSAT 469
C C +C CPT AL H + + F C +CG CV CP++ L T
Sbjct: 308 CIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNECGECVDVCPQKTLELT 363
Score = 34.7 bits (78), Expect = 7e-06
Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 420 CTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWNKAAR 479
C C SC CPT A L L F C G C KACP + + ++K
Sbjct: 34 CIQCFSCATACPTGA--LVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFPYSK--- 88
Query: 480 QGVVTLHQEEPAKCLRCHK--PFAPQSMITMLQTKLRGHSHFATPEALNRIAMCEDC 534
C+ C K P +I++ + P+ IA+ +DC
Sbjct: 89 -----------GHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQ--EPIAVTKDC 132
Score = 30.8 bits (68), Expect = 1e-04
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 13/48 (27%)
Query: 186 CERCVDACPAGALSSEGSEQTGHRIQINPY-LCQGVGTCATACPTEAI 232
C C ACP A I+I P+ C +CATACPT A+
Sbjct: 14 CNACAKACPTEA------------IEIAPFKTCIQCFSCATACPTGAL 49
Score = 28.5 bits (62), Expect = 5e-04
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 448 EQDCVQCGLCVKACPEQVLSATP 470
E C+ C C KACP + + P
Sbjct: 8 EDACLVCNACAKACPTEAIEIAP 30
Score = 27.3 bits (59), Expect = 0.001
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 210 IQINPYLCQGVGTCATACPTEAIHYA 235
I I C CA ACPTEAI A
Sbjct: 4 ISIQEDACLVCNACAKACPTEAIEIA 29