Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  411 bits (1056), Expect = e-119
 Identities = 229/560 (40%), Positives = 321/560 (57%), Gaps = 39/560 (6%)

Query: 15  RARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDG-- 72
           +ARQ  +  T  L NLIPPTVSY + G  LIIGP  L     + LS+MAS  +L+ +   
Sbjct: 16  QARQNVLAQTQILQNLIPPTVSYTTEGTVLIIGPEDLARLAADKLSTMASRVILANEAIT 75

Query: 73  -----------EPGTQSNLYYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIV 121
                         T    YY   + I GFLG F V+VE+      L+  AI    FD+V
Sbjct: 76  SQDETHLERVMAAATNVESYYNKLIGIKGFLGQFQVSVEHQNGAAELSLVAIRKPHFDMV 135

Query: 122 LDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSSR 181
           LD+S    ++ E+  PGYF VG+   KLA+ALE++P L+G FDKP+Y +++ DLCAH   
Sbjct: 136 LDLSSTPCLNLEMLPPGYFYVGQDEAKLAEALEQLPELVGKFDKPRYVKINADLCAHDRN 195

Query: 182 GVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTD 241
           G+ GC RC++ CPA A+SS        +I+++PYLC G G+CA+ CPT AI Y LP P  
Sbjct: 196 GINGCNRCLNFCPADAISS-----VAKKIEVDPYLCHGAGSCASTCPTGAISYDLPTPQA 250

Query: 242 TQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDN----VIPVVVEELPSVG 297
              ++ ++++ Y +     P++L     H+  N +    + D+    V+PV +EE+    
Sbjct: 251 LHSYLNKMISRYREQAQTAPVILF----HD--NAVGAGFINDDLAGDVLPVALEEITVAS 304

Query: 298 IDSWFAALVNGATQVLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKET--IDILYLE 355
           ID W AAL  GA QVL   +    PT+ ++L  E+++A S+L  +G P+    ID   L 
Sbjct: 305 IDHWLAALAWGARQVLVLNTEATAPTLTQMLKGELALANSILDEMGQPQRLSLIDPSMLA 364

Query: 356 SLREGMPVLCEQPLGLKLGDLIGNKRERLFTALDAL---AETLNAQPSVQPLSISAPYGT 412
           +L   + +  + P+ +        KR  LF A+D L   A  +N   S+     + PYG 
Sbjct: 365 NLASVLDISLDWPVIVPGAFASSTKRNTLFEAIDHLNSQAGEINTCLSIN----NVPYGK 420

Query: 413 IECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQL 472
           +      CTLCMSCVA+CPT AL   GD PAL FIEQ+CVQCGLC  ACPE+V+S TPQ+
Sbjct: 421 VSVNVEKCTLCMSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCESACPEKVISLTPQI 480

Query: 473 NWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCE 532
           N++KAARQ   TL +E P +C+RC  PFA QSM+  +   +  HS F+    + R+ MC 
Sbjct: 481 NFDKAARQQQHTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSA--NIERLKMCG 538

Query: 533 DCRVVDMFEAMAHDPEQQLK 552
           DCRV DMFE +  DPE+QL+
Sbjct: 539 DCRVKDMFEDILQDPEKQLR 558