Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 193 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 33/113 (29%), Positives = 46/113 (40%), Gaps = 11/113 (9%)

Query: 382 ERLFTALDALAETLNAQPSVQPLSISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGDS 441
           E+L + +    E LNA+   Q   ++        +  +C  C  C+  CP  A+  AG  
Sbjct: 82  EKLASLMGVEPEPLNAEAQSQVKKVAY------IREDECIGCTKCIQACPVDAIIGAGKL 135

Query: 442 PALRFIEQDCVQCGLCVKACPEQVLSATPQL----NWNKAARQGVVTLHQEEP 490
                +  DC  C LCV+ CP   +   P      NWN       VTL QE P
Sbjct: 136 MHT-VLTADCTGCDLCVEPCPVDCIDMVPVTQNLKNWNWRLNAIPVTLIQETP 187



 Score = 33.1 bits (74), Expect = 9e-06
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 13/87 (14%)

Query: 185 GCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQK 244
           GC +C+ ACP  A+   G+ +  H +      C G   C   CP + I            
Sbjct: 116 GCTKCIQACPVDAII--GAGKLMHTVLTAD--CTGCDLCVEPCPVDCIDMVP-------- 163

Query: 245 FIERLLANYHQAGGEKPIVLICSSRHE 271
            + + L N++      P+ LI  + HE
Sbjct: 164 -VTQNLKNWNWRLNAIPVTLIQETPHE 189



 Score = 23.9 bits (50), Expect = 0.006
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 198 LSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232
           L++E   Q      I    C G   C  ACP +AI
Sbjct: 95  LNAEAQSQVKKVAYIREDECIGCTKCIQACPVDAI 129