Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  219 bits (557), Expect = 3e-61
 Identities = 165/531 (31%), Positives = 245/531 (46%), Gaps = 39/531 (7%)

Query: 38  ESGGHTLIIGPTMLIERITEPLSSMASITLLSVDGEP-----GTQSNLYYADTVEISGFL 92
           +S G TLI+G   +     + LS    IT+L   G        T+  +         G L
Sbjct: 124 DSTGVTLILGRDEVAIEAADALSEHLDITVLMQPGSQITPPMQTRFPVLQGRIRTALGHL 183

Query: 93  GAFSVNVENHG------KRVNLAQAAIGG--NSFDIVLDMS-LNGLMSEEVPVPGYFPVG 143
           GAF++ V+++       + V   +AA  G  +  D+V+D++    L +     PGY    
Sbjct: 184 GAFTLTVDDYAAPSPSSREVLKFEAARDGAVSRADLVVDLTGTQPLFAAHDLRPGYLRAD 243

Query: 144 RGYPK-LADALEEIPTLMGTFDKPKYFRLDPDLCAHSSRGVKGCERCVDACPAGALSSEG 202
              P+ +AD + +   ++GTFDKP Y     DLCAHS  G+ GC RC+  CP GA++  G
Sbjct: 244 PKNPRAVADLIAKAGQMVGTFDKPVYIDFLADLCAHSRNGITGCTRCLSLCPTGAITPNG 303

Query: 203 SEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTDTQKFIERLLANYHQAGGEK-P 261
                  +QI+P +C G G CA ACPT A  YALP+       +   L  +H AGG   P
Sbjct: 304 DS-----VQIDPAICAGCGQCAAACPTGAAAYALPDVATVAARLRAALKAWHDAGGTTAP 358

Query: 262 IVLICSSRHESYNVMAL----KVLPDNVIPVVVEELPSVGIDSWFAALVNGATQVLFAAS 317
           ++L+  + H    + A       LP +VIP+ + E+   G +   AA   GA  V     
Sbjct: 359 VILLHDADHGEPLINASGRYGNGLPAHVIPLGLNEITQAGPEVLAAAFAYGAGAVALLG- 417

Query: 318 RHMPPTIQRILNQEMSMAQSLLTHLGL-PKETIDILYLESLREGMPVLCEQPLGLKLGDL 376
           R  P      L   + +   +   +G  P   I+    ++L   + VL +  +       
Sbjct: 418 RAKPLHDVDGLRAGIELVTGVAEAMGHGPVTLIETDDPDALEAALDVLPKSAVHAAPSSF 477

Query: 377 I--GNKRERLFTALDALAETLNAQPSVQPLSISAPYGTIECQTSDCTLCMSCVAVCPTRA 434
           +   +KR  L  A   +           PL   AP+G++      CTLC +C  VCPT A
Sbjct: 478 LPPADKRGLLVMAFAEMNRAAPKPAQTLPLPQGAPFGSVTVDPEACTLCQACTGVCPTGA 537

Query: 435 LHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLN---WNKAARQGVVTLHQEEPA 491
           L    ++P LRF E  CVQCGLC   CPE  ++ TPQL+   W+   R     LH+E P 
Sbjct: 538 LLDNPETPMLRFTESACVQCGLCAATCPETAITLTPQLDFAAWDTPRR----ILHEEPPF 593

Query: 492 KCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNR---IAMCEDCRVVDM 539
            C  C + FA +S I  ++++L  H  F       R   ++MCEDCRV ++
Sbjct: 594 CCTVCGEAFATRSGIDRVKSRLVDHWMFQGETGAARLKVLSMCEDCRVQEI 644