Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  415 bits (1067), Expect = e-120
 Identities = 230/560 (41%), Positives = 324/560 (57%), Gaps = 39/560 (6%)

Query: 15  RARQYAIEHTVELTNLIPPTVSYESGGHTLIIGPTMLIERITEPLSSMASITLLSVDG-- 72
           +ARQ  +  T  L NLIPPTVSY + G  LIIGP  L     + LS+MAS  +L+ +   
Sbjct: 11  QARQNVLAQTQILQNLIPPTVSYTTEGTVLIIGPEDLARLAADKLSTMASRVILANEAIT 70

Query: 73  -----------EPGTQSNLYYADTVEISGFLGAFSVNVENHGKRVNLAQAAIGGNSFDIV 121
                         T    YY   + I GFLG F V+VE+      L+  AI    FD++
Sbjct: 71  SQDETHLEQVMAAATDVESYYNKLIGIKGFLGQFQVSVEHQNGAAELSVVAIRKAHFDLI 130

Query: 122 LDMSLNGLMSEEVPVPGYFPVGRGYPKLADALEEIPTLMGTFDKPKYFRLDPDLCAHSSR 181
           LD+S    ++ E+  PGYF VG+   KLADALE++P L+G FDKP+Y +++ DLCAH   
Sbjct: 131 LDLSSTPCLNLEMLPPGYFYVGQDDAKLADALEQLPELVGQFDKPRYVKINADLCAHDRN 190

Query: 182 GVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAIHYALPNPTD 241
           G+ GC RC++ CPA A+SS        +I+++PYLC G G+CA+ACPT AI Y LP P  
Sbjct: 191 GINGCNRCLNFCPADAISS-----VAKKIEVDPYLCHGAGSCASACPTGAIGYDLPTPQA 245

Query: 242 TQKFIERLLANYHQAGGEKPIVLICSSRHESYNVMALKVLPDN----VIPVVVEELPSVG 297
              ++ +++  Y +     P++L     H+  N +   ++ D+    V+PV +EE+    
Sbjct: 246 LHSYLNKIINRYREQAQTAPVILF----HD--NAVGASLIGDDLAGDVLPVALEEITVAS 299

Query: 298 IDSWFAALVNGATQVLFAASRHMPPTIQRILNQEMSMAQSLLTHLGLPKET--IDILYLE 355
           ID W AAL  GA QVL   +    PT+ ++L  E+++A S+L  +G P+    ID   L 
Sbjct: 300 IDHWLAALAWGARQVLILNTEATAPTLTQMLKGELALANSMLDEIGQPQRLSLIDPSMLT 359

Query: 356 SLREGMPVLCEQPLGLKLGDLIGNKRERLFTALDAL---AETLNAQPSVQPLSISAPYGT 412
           +L   + +  + P+ +        KR  LF A+D L   A  +N+  S+     + PYG 
Sbjct: 360 NLEPLLDISLDWPVIVPGAFAPTTKRNTLFDAIDHLNSQAGEINSSLSIN----NVPYGK 415

Query: 413 IECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQL 472
           +      CTLCMSCVA+CPT AL   GD PAL FIEQ+CVQCGLC  ACPE+V+S TPQ+
Sbjct: 416 VSVNVEKCTLCMSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQI 475

Query: 473 NWNKAARQGVVTLHQEEPAKCLRCHKPFAPQSMITMLQTKLRGHSHFATPEALNRIAMCE 532
           N++KAARQ + TL +E P +C+RC  PFA QSM+  +   +  HS F+    + R+ MC 
Sbjct: 476 NFDKAARQQLQTLKEEAPFECIRCGSPFATQSMVHRMLDMVGAHSAFSA--NIERLKMCG 533

Query: 533 DCRVVDMFEAMAHDPEQQLK 552
           DCRV DMFE +  DPE+QL+
Sbjct: 534 DCRVKDMFEDILQDPEKQLR 553