Pairwise Alignments

Query, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., ferredoxin-type protein NapF (RefSeq) from Shewanella sp. ANA-3

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 417 TSDCTLCMSCVAVCPTRALHLA-GDSPALRFIEQDCVQCGLCVKACPEQVLSATPQLNWN 475
           T  CT C +C+  C T+ ++   G  P + F + +C  C  C   CPE+ L    Q  W 
Sbjct: 33  TDICTRCTACITACETKIIYKGDGGFPEVSFKDNECTFCRRCASVCPEEKLFDLTQTPWQ 92

Query: 476 KAA 478
             A
Sbjct: 93  HKA 95



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 415 CQTSDCTLCMSCVAVCPTRALHLA---GDSPALRFIEQDCVQCGLCVKACPEQVLSATP 470
           C T     C SC   C  RA+      G++P  +   + C  CG CV  CP Q +S  P
Sbjct: 101 CLTYQGIWCQSCKDACEPRAISFTLSVGNAPMPKIDSELCTGCGACVAPCPSQAISIKP 159



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 186 CERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232
           C+ C DAC   A+S   S       +I+  LC G G C   CP++AI
Sbjct: 109 CQSCKDACEPRAISFTLSVGNAPMPKIDSELCTGCGACVAPCPSQAI 155



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 7/30 (23%)

Query: 170 RLDPDLCAHSSRGVKGCERCVDACPAGALS 199
           ++D +LC        GC  CV  CP+ A+S
Sbjct: 134 KIDSELCT-------GCGACVAPCPSQAIS 156