Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 905 a.a., Nitrate reductase (EC 1.7.99.4) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (518), Expect = 3e-56
 Identities = 155/519 (29%), Positives = 241/519 (46%), Gaps = 42/519 (8%)

Query: 62  EVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKY 121
           ++  + C +C VGCG+  E       G      HP N G  C+KG+ L   G    R  Y
Sbjct: 4   QITASTCCYCGVGCGVLIEHDGERILGVSGDPAHPANFGKLCSKGSTLHLTGDLAARALY 63

Query: 122 PMKLEGGKW---KKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMA 178
           P +L  GK     +  W+ A++       +   E GPDSV F  S +   E  Y F K+A
Sbjct: 64  P-ELRLGKGLARARSDWDSALDHAASVFAETIAEHGPDSVAFYISGQLLTEDYYAFNKLA 122

Query: 179 -SLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVA 237
            +L GTNN+D  +R+C S+ V G   + G  A   S+ D+     ++ +GSN A AHP+ 
Sbjct: 123 RALVGTNNIDSNSRLCMSSAVVGYKRSLGADAPPCSYEDLEMSDCVMIVGSNMAYAHPIL 182

Query: 238 MQHILIAKEKN-SCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDK 296
            + +  AK +    KI+V DPRRT T   AD  +++ PG+DVA   G+L  +   +W D+
Sbjct: 183 FRRLEEAKSRRPQMKIIVIDPRRTDTCDLADLHLAILPGTDVALFHGILHLLLWEDWVDR 242

Query: 297 EYIRQRVFGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGTQH 356
           ++I+    G+ +++  V  + P+ V ++ G+S E+++  A+ +  +     +WCMG  Q 
Sbjct: 243 DFIKAHTEGLADLKNLVRDYIPSMVAQLCGISVEQLHLCAEWVGTSPSFLSLWCMGLNQS 302

Query: 357 TTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSW 416
           T G+    A   L LA G IG+ G G     G  N  G  + G LS+ LPG+      + 
Sbjct: 303 TAGSAKNSALINLHLATGQIGRPGAGPFSLTGQPNAMGGRETGSLSNLLPGH--REAANP 360

Query: 417 KHWASV---WGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIR 473
           +H A V   WGV+                LP  T G+      + V   K        I+
Sbjct: 361 EHRADVARYWGVE---------------QLP-ATTGLSAIELFEQVRSGK--------IK 396

Query: 474 AMFY-WGHAVNSQTRGVEMKKAMQKLDMMVIVDPYPTV-AAVMNDRTDGVYLLPATTQFE 531
           A++    +   S      +++A+Q    +V+ + + T   A   D      LLPA +  E
Sbjct: 397 ALWIACTNPAQSMPDQTAVREALQACPFVVLQEAFRTTETAAFAD-----LLLPAASWGE 451

Query: 532 TYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKL 570
             GSVT S R I    + I    E++ D  I    +Q+L
Sbjct: 452 KEGSVTNSERRISHVRRAIGAPGEARADWAITVDFAQRL 490



 Score = 46.6 bits (109), Expect = 7e-09
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 26/180 (14%)

Query: 763 WTFPDRVPLHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSG 822
           W FP+   +    LY         +PT   +A     P  Y++ + + +   YP+ L +G
Sbjct: 541 WPFPEGATVGTARLYVD-----GIFPTDSGRARFVADP--YRAAK-ELRDARYPLTLNTG 592

Query: 823 RLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAM 882
           RL +   G   T +   L     E  + ++P +        GD+V ++ + +G + V   
Sbjct: 593 RLRDQWHGMSRTGTAAQLFGHVNEAVLSLHPDELQRHRLQAGDLVSLK-SRRGSVIVAVD 651

Query: 883 VTRRVKPGMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQETK 942
               V+PG AFLP H+G +F                 +    NT T   +DP++   E K
Sbjct: 652 SDDSVRPGQAFLPMHWGDRF-----------------LKGGVNTLTQPAFDPLSKQPELK 694