Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., formate dehydrogenase, alpha subunit, proteobacterial-type from Pseudomonas stutzeri RCH2

 Score =  243 bits (620), Expect = 5e-68
 Identities = 187/672 (27%), Positives = 296/672 (44%), Gaps = 127/672 (18%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCG 76
           + ++RR F K   +  G +++ A    P     A++    +   T   R  C +CSVGCG
Sbjct: 1   MDMNRRQFFKVCGVGLGASSMAALGMAPPTAY-AESIRHFKLTNTRETRNTCPYCSVGCG 59

Query: 77  I--YAEVQNGVWTGQ-----EPAFDHPFNAGGHCAKGAALREHGHGERRLKYPMKLEGG- 128
           +  Y++   G    Q     E   DHP N G  C KGA L +  H   RL +P   E G 
Sbjct: 60  LILYSQGSGGKNVAQNIIHIEGDSDHPVNRGTLCPKGAGLLDFVHSPNRLTHPEVREAGT 119

Query: 129 -KWKKISWEQAINEIG-------DKALKIREESGPD-----SVYFLGSAKHSNEQAYLFR 175
            +WK+I W +A++ I        D     R + G       +  FL ++  SNE  Y+  
Sbjct: 120 NEWKRIEWSEALDRIARLMKDDRDANFIERNDKGQTVNRWLTTGFLAASASSNEAGYITH 179

Query: 176 KMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHP 235
           K+    G    D+QAR+ H  TVA +A T+G GAMTN ++D+ N   +L +G N AEAHP
Sbjct: 180 KVVRSLGILAFDNQARVUHGPTVASLAPTFGRGAMTNHWSDIQNADLVLIMGGNAAEAHP 239

Query: 236 VAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKN---- 291
              + +  AK +N  ++VV DPR TR+A+ AD +  +R G+D+AF+ G++ ++ +N    
Sbjct: 240 CGFKWVTEAKARNKARLVVVDPRFTRSASVADMYAPIRTGTDIAFLGGLINYLLENDKIQ 299

Query: 292 -----NWEDKEYIRQRVFGMDE-------------------------------------- 308
                N+ D  +I +  FG ++                                      
Sbjct: 300 HEYVVNYTDVSFIVKEGFGFEDGLFNGYDAEKRSYPDKSAWSYELDEDGFARVDKSLTHP 359

Query: 309 ------IRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAE-NRPG---CVVWCMGGTQHTT 358
                 ++   +++TP  V  + G  ++++    +T+AE + PG    +++ +G TQH+ 
Sbjct: 360 RCVFNLLKQHYSRYTPEVVSNICGTPQDKMLQVWETIAETSAPGKVMTIMYALGWTQHSV 419

Query: 359 GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYY--------- 409
           G+   R   +++L LGNIG  GGG N  RGH N+QG TDLG+LS+ LPGY          
Sbjct: 420 GSQMIRTGAMVQLLLGNIGMPGGGMNALRGHSNIQGLTDLGLLSNLLPGYMTLPLEAEQD 479

Query: 410 -----------GLTEGSWKHWASVWGVDFEWIKNRFDQGT-------YNGALPMETPGIP 451
                       L  G   +W          +K  + +         Y+    ++ PG  
Sbjct: 480 YTAYITKRTAKPLRPGQLSYWQHYEKFHVSLMKAWYGRNATAENNWGYDWLPKLDIPGYD 539

Query: 452 VSRWIDGVLENKDNLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTV 510
           V +  D        +  +  +   F  G + + S     ++  A+ KL  +VI+DP  T 
Sbjct: 540 VLKVFD--------MMYQGQVNGYFCQGFNPIASFPNKAKVSAALAKLKYLVIMDPLATE 591

Query: 511 -------AAVMNDRTDG-----VYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKP 558
                  A   ND         V+ LP T   E  GS+  S R +QW  +  EP  +++ 
Sbjct: 592 TSEFWRNAGEYNDVDTASIQTTVFRLPTTCFAEEDGSLVNSGRWLQWHWKAAEPPGQAQT 651

Query: 559 DHEIMYLLSQKL 570
           D  IM  L  +L
Sbjct: 652 DVVIMGGLFHRL 663



 Score = 49.7 bits (117), Expect = 1e-09
 Identities = 72/261 (27%), Positives = 102/261 (39%), Gaps = 49/261 (18%)

Query: 708  DKLLKQLGWWDDLTAEEKAAAEGKNWKTDLSGGIQRVAIKHGCIPF-----GNAKARAIV 762
            DK  K+L WWD           GK   TD+         + G  PF     G A+  A+ 
Sbjct: 796  DKQKKRLVWWDG----------GKWGGTDVPDFKVDSRPEDGMNPFIMNPEGVARLFAVD 845

Query: 763  WTFPDRVPLHREPLYTPRRDLLADYPTWDDQAFIFRVPT--LYKS-IQAQDKSVEYPIIL 819
                   P H EP  TP    +   P     A     P   ++K+ ++    + ++P   
Sbjct: 846  KMNEGPFPEHYEPFETP----IGRNPLHPGNALAISNPAARVFKNDMELFGTAEDFPYAA 901

Query: 820  TSGRLVE-YEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIK 878
            T+ RL E +    +  R N   A  Q E FVE+    A +LG + G+ V V  + +G IK
Sbjct: 902  TTYRLTEHFHFWTKHCRLN---AITQPEQFVEIGEVLAKELGIVAGERVKVS-SNRGYIK 957

Query: 879  VKAMVTRRVKP--------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTY 930
              A+VT+R+KP            +P H+G  F G                G   NT T +
Sbjct: 958  AVAVVTKRIKPLTVDGQTVHQIGIPLHWG--FAGVARN------------GYLTNTLTPF 1003

Query: 931  GYDPVTLMQETKVTLCNIRKA 951
              D  T   E K  L N+ KA
Sbjct: 1004 VGDANTQTPEFKSFLVNVEKA 1024