Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1026 a.a., formate dehydrogenase-N subunit alpha from Pseudomonas aeruginosa PA14

 Score =  247 bits (630), Expect = 3e-69
 Identities = 191/676 (28%), Positives = 300/676 (44%), Gaps = 133/676 (19%)

Query: 17  LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVD--RSAKTEVKRTICSHCSVG 74
           + ++RR F K   +  GG+++ A    P    +A A +V   + A T   R  C++CSVG
Sbjct: 1   MDMNRRQFFKVCGIGLGGSSLAALGMAP---TEAFADQVRHFKLAHTVETRNTCTYCSVG 57

Query: 75  CGI--YAEVQNGVWTGQ-----EPAFDHPFNAGGHCAKGAALREHGHGERRLKYPMKLEG 127
           CG+  Y++        Q     E   DHP N G  C KGA L ++ H   RLKYP   E 
Sbjct: 58  CGLIMYSQGDGAKNVAQNIIHIEGDADHPVNRGTLCPKGAGLLDYIHSPNRLKYPEVREA 117

Query: 128 G--KWKKISWEQAINEIG-------DKALKIREESGPD-----SVYFLGSAKHSNEQAYL 173
           G  +WK+I W++A+  I        D     + E G       +  FL ++  SNE  Y+
Sbjct: 118 GSSEWKRIEWDEALERIAKLMKEDRDANFVEKNEQGQTVNRWLTTGFLAASASSNEAGYI 177

Query: 174 FRKMASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEA 233
             K+    G    D+QAR+ H  TVA +A T+G GAMTN + D+ N   +L +G N AEA
Sbjct: 178 THKVMRSLGILGFDNQARVUHGPTVASLAPTFGRGAMTNHWTDIKNADLVLIMGGNAAEA 237

Query: 234 HPVAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKN-- 291
           HP   + +  AK  N  +++V DPR TR+A+ ADY+  +R G+D+AF+ G++ ++ +N  
Sbjct: 238 HPCGFKWVTEAKAHNKARLLVVDPRFTRSASVADYYAPIRTGTDIAFLGGLINYLLENDK 297

Query: 292 -------NWEDKEYIRQRVFGMDE------------------------------------ 308
                  N+ D  +I +  F  ++                                    
Sbjct: 298 IQHEYVRNYTDVSFIVKEGFSFEDGLFNGYDAEKRTYPDKSSWGYEIGEDGYAKVDPTLT 357

Query: 309 --------IRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAE-NRPG---CVVWCMGGTQH 356
                   ++   +++TP  V  + G  ++ +      +AE ++PG    +++ +G TQH
Sbjct: 358 HPRCVFNLLKQHYSRYTPDVVSNICGTPKDMMLKVWAEIAETSKPGKVMTIMYALGWTQH 417

Query: 357 TTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLT---- 412
           + G    R   +++L LGNIG  GGG N  RGH N+QG TDLG+LS++LPGY  L     
Sbjct: 418 SVGAQMIRTGAMVQLLLGNIGMPGGGMNALRGHSNIQGLTDLGLLSNSLPGYLTLAMDAE 477

Query: 413 ----------------EGSWKHWASVWGVDFEWIKNRFDQGT---------YNGALPMET 447
                            G   +W +        +K  F +           +   L M  
Sbjct: 478 QDYDAYIAKRTAKPLRPGQLSYWQNYGKFHVSLMKAWFGKSATKENNWCYDWLPKLDMPG 537

Query: 448 PGIPVSRWIDGVLENKDNLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDP 506
            G  V R+ D + + K        +   F  G + + S     ++  A+ +L  MV++DP
Sbjct: 538 AGYDVLRYFDMMYQGK--------VNGYFCQGFNPIASFPNKAKVGAALARLKWMVVMDP 589

Query: 507 YPTVAAVM-------NDRTDG-----VYLLPATTQFETYGSVTASNRSIQWRDQVIEPLF 554
             T  +         ND         V+ LP +   E  GS+  S R +QW  +  EP  
Sbjct: 590 LVTETSEFWRNVGEYNDVDTASIKTTVFRLPTSCFAEEDGSIVNSGRWLQWHWKGAEPPG 649

Query: 555 ESKPDHEIMYLLSQKL 570
           +++PD  IM  L  +L
Sbjct: 650 QARPDIAIMAGLFHRL 665



 Score = 49.7 bits (117), Expect = 1e-09
 Identities = 71/258 (27%), Positives = 102/258 (39%), Gaps = 51/258 (19%)

Query: 712  KQLGWWDDLTAEEKAAAEGKNWK-TDLSGGIQRVAIKHGCIPF-----GNAKARAIVWTF 765
            K+L WW+           GK+W  TD+      V  + G  PF     G A+  A+    
Sbjct: 802  KRLVWWN-----------GKSWGGTDVPDYKADVPPEAGMNPFIMNPEGVARLFAVDKMA 850

Query: 766  PDRVPLHREPLYTPRRDLLADYPTWDDQAFIFRVPT--LYKS-IQAQDKSVEYPIILTSG 822
                P H EP  TP    +   P   D       P   ++K+ ++    + E+P   T+ 
Sbjct: 851  EGPFPEHYEPFETP----IGVNPLHRDNRKAISNPAARVFKNDMELFGTADEFPYAATTY 906

Query: 823  RLVE-YEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKA 881
            RL E +    +  R N   A  Q E FVE+    A +LG   GD V V  + +G IK  A
Sbjct: 907  RLTEHFHYWTKHCRLN---AITQPEQFVEIGEALAKELGINAGDKVKV-SSNRGYIKAVA 962

Query: 882  MVTRRVKP--------GMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYD 933
            +VT+R++P            +P H+G      +              G  ANT T +  D
Sbjct: 963  VVTKRIRPLQVDGKTVHHVGIPIHWGFAGMARN--------------GFLANTLTPFVGD 1008

Query: 934  PVTLMQETKVTLCNIRKA 951
              T   E K  L N+ KA
Sbjct: 1009 GNTQTPEFKSFLVNVEKA 1026