Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1410 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella loihica PV-4

 Score =  248 bits (633), Expect = 2e-69
 Identities = 178/618 (28%), Positives = 296/618 (47%), Gaps = 69/618 (11%)

Query: 52   ASEVDRSAKTEVKRT--ICSHCSVGCG--IYAEVQNGVWTGQEPAFDHPFNAGGHCAKGA 107
            A +  +  K E+K+T  +C++C VGC   I+++   G             N G  C KG 
Sbjct: 707  ARDKRQGVKHELKQTSTVCTYCGVGCRVIIHSDPVTGEIKRVSGDSRSQVNEGMLCVKGR 766

Query: 108  ALREHGHGERRLKYPMKLEGGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHS 167
               +  + ++RL  P+  + G+   +SW +AI+ IG +  +I+ E G D++  L SAK +
Sbjct: 767  FGFDFINSQQRLTQPLLRKDGELVPVSWNEAIDYIGTELGRIKAEHGGDAIAGLASAKAT 826

Query: 168  NEQAYLFRKM-ASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFI 226
            NE  YLF+K+  S+ GTNN+DH AR+CH++TV  +  + G GAMTN    + +   +  +
Sbjct: 827  NEDNYLFQKLFRSVIGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFIL 886

Query: 227  GSNPAEAHPVAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLW 286
            GS+   AHP+    I  A  ++  ++VVADP+R   A  A+ +V  RPGSDV  +  ++ 
Sbjct: 887  GSDTEAAHPIIASKIKQAVSQHGARLVVADPKRVSIADSAELYVRHRPGSDVMLLNAIMQ 946

Query: 287  HVFKNNWEDKEYIRQRVFGMDEIRAEVAK--WTPAEVERVTGVSEEEVYNTAKTLAENRP 344
             + K  W D++YI +RV G D +R EV K  ++     ++TGV EEE+   A+ +     
Sbjct: 947  EIIKQGWHDEDYIDRRVEGFDALRTEVMKDDYSLDNAAKITGVGEEEIAQLARMIGTAEK 1006

Query: 345  GCVVWCMGGTQHTTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDT 404
              + + MG TQHT+G++N  A   L+L  GNIG  G G N  RG  NVQGA D+G L + 
Sbjct: 1007 TAIYYAMGITQHTSGHDNVTAIANLQLLCGNIGIEGAGINPLRGQSNVQGACDMGALPNY 1066

Query: 405  LPGYYGLTEGSWKHWASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKD 464
              GY  +T+                ++  F Q      LP +  G+  +  +  +   + 
Sbjct: 1067 FTGYQKVTDPE--------------VQAAFRQAWQQEWLP-DQIGLAATEMMHALAHGR- 1110

Query: 465  NLQQRENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYL 523
                   ++A++  G + V S      + + ++  +++++ D + T  A + D      +
Sbjct: 1111 -------LKALYVMGENPVLSDPDQAHVMQGLESAELLIVQDIFMTETAQLAD-----VV 1158

Query: 524  LPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGIADQLCKHIRVE 583
            LPA +  E  G  T + R +Q     I+    ++ D +I+  +++ LG AD        E
Sbjct: 1159 LPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRDWQIITDIAKALG-ADW-----HYE 1212

Query: 584  NNQPLIEDITREFNRGMWTIGYTGQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMP 643
            +   + +++TR       T  Y G            W     +T             G  
Sbjct: 1213 DEASIWQELTRV------TPQYRG----------IQWQDTDPSTPKG--------LLGKQ 1248

Query: 644  WPCWGTPEMKHPGTHILY 661
            WPC   PE  H GT +++
Sbjct: 1249 WPC---PEPGHEGTRLMH 1263



 Score = 61.6 bits (148), Expect = 3e-13
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 23/138 (16%)

Query: 814  EYPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAE 873
            +YP  L++GRL+E    G  TR    L  L     V ++  DA+ LG  +GD++ +    
Sbjct: 1289 DYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGSPR-VMMSAIDADRLGVNNGDVLTLS-TR 1346

Query: 874  KGRIKVKAMVTRRVKPGMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYD 933
            +G I + A VTRR +PG+ FLPFHF                        AAN  T    D
Sbjct: 1347 RGSINIAAFVTRRAQPGVLFLPFHF---------------------AEAAANKLTNNVLD 1385

Query: 934  PVTLMQETKVTLCNIRKA 951
            PV  + E K+    + KA
Sbjct: 1386 PVAKIPEFKICAVRVEKA 1403