Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score =  267 bits (682), Expect = 2e-75
 Identities = 187/634 (29%), Positives = 301/634 (47%), Gaps = 78/634 (12%)

Query: 62  EVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKY 121
           +V  TIC +C  GCGI   V++G      P   HP N G  C KG    E  H E RL  
Sbjct: 5   KVVHTICPYCGTGCGIDLVVKDGKVVDSHPFKRHPVNEGKVCIKGNYCYEFVHSEDRLTK 64

Query: 122 PMKLEGGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMA-SL 180
           P+  + G++ + +W++A++ I  K     ++  PD V F   A+ +NE++Y  +K A ++
Sbjct: 65  PLIKKNGEFIEATWDEALDLIAGKL----KQYSPDEVAFFSCARGTNEESYALQKFARTV 120

Query: 181 WGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQH 240
             TNNVDH ARI H+ TV G+   +G GAMTNS  D+     +L  GSN  EAHP+  + 
Sbjct: 121 LKTNNVDHCARI*HAPTVVGLGECFGSGAMTNSITDLAQADVLLIYGSNTFEAHPLIARS 180

Query: 241 ILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYIR 300
           I+ AKE N  KI+  DPR T TA  AD  + L PGS++  I  +   + +    D+E+I+
Sbjct: 181 IVKAKE-NGTKIIAIDPRTTHTAKMADLHLKLIPGSNIDLINTITNIIIQEGMADEEFIK 239

Query: 301 QRVFGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGTQHTTGN 360
            R  G DE++  V+K+T  +   ++G+  E +   A+         +++C+G T++T G 
Sbjct: 240 NRTEGYDELKDVVSKYTLEKTAELSGIPAETILEAARMYGSAENASIMYCLGVTEYTFGV 299

Query: 361 NNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKHWA 420
           +N ++ C L +  GN+G+ G G N  RG +NVQGA D+G L +  PGY  + E       
Sbjct: 300 DNVKSCCNLAMVTGNLGRPGTGVNPLRGQNNVQGACDMGALPNVFPGYQKVGEA------ 353

Query: 421 SVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIRAMFYWGH 480
                 +E ++N ++    N  + + +P +                +  E ++ +   G 
Sbjct: 354 ------YERLENLWETADLNREIGLTSPEV--------------LHKAGEQVKFLHIVGE 393

Query: 481 AVNSQTRGV-EMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYLLPATTQFETYGSVTAS 539
                   +  ++KA++ LD  V+ D + T  A + D      +LPA    E  G+ T S
Sbjct: 394 DPMVADADINHVEKALKSLDFFVVQDIFLTETAKLAD-----VVLPAACWAEKDGTFTNS 448

Query: 540 NRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGIADQLCKHIRVENNQPLIEDITREFNRG 599
            R +Q   + ++   ++ PD  I+  L++K+G  ++L      E+   + +++ +   + 
Sbjct: 449 ERRVQRIRKAVDAPGDALPDWLIVRKLAEKMGAGEKL----NFESASEIFDEMAKVIPQ- 503

Query: 600 MWTIGYTGQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMPWPCWGTPEMKHPGTHI 659
                Y G S ERL                           G+ WPC  TPE   PGT I
Sbjct: 504 -----YAGMSFERLGID------------------------GLQWPC-KTPE--DPGTPI 531

Query: 660 LYDTSKTVAEGGGNFRTRFGVEFEGKSLLAEDSY 693
           L+        G G F     VE +    L ++ Y
Sbjct: 532 LHKEKFLRPNGLGKFTP---VEHKDADELIDEEY 562



 Score = 69.7 bits (169), Expect = 6e-16
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 22/137 (16%)

Query: 814 EYPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAE 873
           EYP+ILT+GR++ +   G  TR    +     E F+E+N +DA +LG   G+ V V  + 
Sbjct: 561 EYPLILTTGRIIFHYNSGTMTRRCDSITNEIDENFIEINTEDAKELGIKPGEKVRV-SSR 619

Query: 874 KGRIKVKAMVTRRVKPGMAFLPFHFGGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYD 933
           +G +   A VT  V  G+ ++ FHF                     + EA N  T   YD
Sbjct: 620 RGTVNADARVTENVIKGVVYMSFHF---------------------LEEATNKLTNSAYD 658

Query: 934 PVTLMQETKVTLCNIRK 950
           PV+   E K+    + K
Sbjct: 659 PVSKTAELKICAVKVEK 675