Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1408 bits (3644), Expect = 0.0
 Identities = 654/953 (68%), Positives = 777/953 (81%), Gaps = 5/953 (0%)

Query: 1   MRLIKRSDSVTKEQNQ--LGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRS 58
           M+L ++SD V +  N+  LGISRR FMK   +A GG A  ASL   GM+R+A+A +V   
Sbjct: 1   MKLTRKSD-VAQVANKPTLGISRRQFMKQAGIATGGIAA-ASLMGTGMMRRAEAKDVPYD 58

Query: 59  AKTEVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERR 118
           A  E+KRTICS C+VGCG+YAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGE+R
Sbjct: 59  APIEIKRTICSACAVGCGLYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKR 118

Query: 119 LKYPMKLEGGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMA 178
           LKYPMKL  GKWKKISWE AINE+GD+ L IR+ESGPDSVYF+GSAK SNE  Y +RK+A
Sbjct: 119 LKYPMKLVDGKWKKISWEDAINEVGDQMLNIRKESGPDSVYFMGSAKFSNEGCYAYRKLA 178

Query: 179 SLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAM 238
           ++WGTNNVDH ARICHSTTVAGVANTWGYGA TNSFND+ N  ++  IG+NPAEAHPV+M
Sbjct: 179 AMWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSFNDIQNANAIFLIGANPAEAHPVSM 238

Query: 239 QHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEY 298
           QHILIAKEKN+ KI+V DPR +RTAA +D   ++RPG+D+ FI+G+LWH+F+N WEDK +
Sbjct: 239 QHILIAKEKNNAKIIVVDPRFSRTAAHSDLHCAIRPGTDIPFIYGMLWHIFENGWEDKTF 298

Query: 299 IRQRVFGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGTQHTT 358
           I+ RVF M+ IRAEV K+ P EV  +TGVSEE VY  AK +AENRPG V+WCMGGTQH  
Sbjct: 299 IQHRVFEMETIRAEVKKFPPKEVANITGVSEEVVYQAAKLMAENRPGTVIWCMGGTQHHV 358

Query: 359 GNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKH 418
           GN NTRAYCIL+LALGN+G SGGG NIFRGHDNVQ ATDLG+L D LPGYYGLT  +W+H
Sbjct: 359 GNANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQAATDLGLLFDNLPGYYGLTTAAWEH 418

Query: 419 WASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIRAMFYW 478
           W +VW +D EW+K+RFD GTY G  PM TPG+P SRW DGVL  KD L Q++NIR  F+W
Sbjct: 419 WTNVWELDMEWMKSRFDHGTYLGREPMTTPGMPCSRWFDGVLLEKDKLAQKDNIRMAFFW 478

Query: 479 GHAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYLLPATTQFETYGSVTA 538
           G +VN+ TR  +++ A+ KLD +V+VDP+PT+A +M+ R +GVYLLPA TQFE  G+V+ 
Sbjct: 479 GQSVNTGTRQRDVRDALDKLDTVVVVDPFPTIAGIMHSRKNGVYLLPACTQFEASGAVSN 538

Query: 539 SNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGIADQLCKHIRVENNQPLIEDITREFNR 598
           S RSIQWR+QVI+PLFESK D EIMY+L++K+GI++Q  K   +  N P++EDI+RE NR
Sbjct: 539 SGRSIQWREQVIQPLFESKNDIEIMYMLAKKVGISEQWAKRWNIAGNMPVVEDISREINR 598

Query: 599 GMWTIGYTGQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMPWPCWGTPEMKHPGTH 658
           GMWTIGYTGQSPER+K H QNW TF   TL A GGP  G+TYG+PWPCWGTPE KHPGT 
Sbjct: 599 GMWTIGYTGQSPERIKQHTQNWGTFSNKTLEAAGGPCKGETYGLPWPCWGTPEAKHPGTQ 658

Query: 659 ILYDTSKTVAEGGGNFRTRFGVEFEGKSLLAEDSYSKGCELQDGYPEFSDKLLKQLGWWD 718
           ILY+  K V +GGGNFR R+GVE+ GK+LLAE ++SKG E+QDGYPEFSDKLLKQLGWWD
Sbjct: 659 ILYNQDKHVKDGGGNFRARYGVEYNGKNLLAEGTFSKGAEIQDGYPEFSDKLLKQLGWWD 718

Query: 719 DLTAEEKAAAEGKNWKTDLSGGIQRVAIKHGCIPFGNAKARAIVWTFPDRVPLHREPLYT 778
           DLTAEEKAAAEGKNWKTDLSGGI RVAIKHGCIPFGNAKAR IVWTFPD+ P+HREP+YT
Sbjct: 719 DLTAEEKAAAEGKNWKTDLSGGIVRVAIKHGCIPFGNAKARCIVWTFPDQAPVHREPIYT 778

Query: 779 PRRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEGGGEETRSNP 838
            RRDL+A YPT+DD   + R+PTLYK++Q  D S +YP+++TSGRLVEYEGGGEE+R NP
Sbjct: 779 ARRDLVAKYPTYDDMQ-VHRLPTLYKTLQENDLSGKYPLVMTSGRLVEYEGGGEESRCNP 837

Query: 839 WLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKPGMAFLPFHF 898
           WLAELQQEMF+E++P DA D    +G+ VWVEGAE GRIKV+AMVT RV PG+ F+P+HF
Sbjct: 838 WLAELQQEMFIEISPADAADRAIRNGEFVWVEGAEGGRIKVQAMVTPRVAPGVTFMPYHF 897

Query: 899 GGKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQETKVTLCNIRKA 951
            G   GE L   YPEGT PYV+GE+ NTA TYGYDPVT MQETK +LC I KA
Sbjct: 898 AGVMHGESLAANYPEGTVPYVIGESCNTALTYGYDPVTQMQETKASLCQIVKA 950