Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 949 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1407 bits (3643), Expect = 0.0
 Identities = 647/952 (67%), Positives = 788/952 (82%), Gaps = 4/952 (0%)

Query: 1   MRLIKRSDSVTKEQ-NQLGISRRAFMKNTSLAAGGAAVGASLFTPGMIRKAQASEVDRSA 59
           MRL +++D V + +   LG++RR F+K+  LA GG A  AS+   GM+RKA+A ++  +A
Sbjct: 1   MRLTRKTDPVVEPKVPALGLNRRQFLKSAGLATGGIAA-ASMLGTGMMRKAEAKDIPHNA 59

Query: 60  KTEVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRL 119
            TEVKRTICSHCSVGCG+YAEVQNGVWTGQEPAFDHPFN GGHCAKGAALREHGHGE+RL
Sbjct: 60  PTEVKRTICSHCSVGCGVYAEVQNGVWTGQEPAFDHPFNQGGHCAKGAALREHGHGEKRL 119

Query: 120 KYPMKLEGGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRKMAS 179
           KYPMKLEGGKWKKISW+QAINE+GDK + IR+ESGPDS+YF+GSAK SNEQAYL+RK A+
Sbjct: 120 KYPMKLEGGKWKKISWDQAINEVGDKMMAIRQESGPDSIYFMGSAKFSNEQAYLYRKFAA 179

Query: 180 LWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQ 239
           LWGTNNVDH ARICHSTTVAGVANTWGYGA TNS ND+ + K +LF+GSNP+EAHPVAMQ
Sbjct: 180 LWGTNNVDHSARICHSTTVAGVANTWGYGAQTNSVNDIRHSKCILFVGSNPSEAHPVAMQ 239

Query: 240 HILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYI 299
           HIL+AKE+ + KI+V DPR TRTAAK+D +V +RPG+D+ FI+G+LWH+F+N WEDK++I
Sbjct: 240 HILVAKERGA-KIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLLWHIFENGWEDKDFI 298

Query: 300 RQRVFGMDEIRAEVAKWTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGGTQHTTG 359
           ++RV+GM+ IR EV K+TP EVE V G  + ++Y  AK +AE +PG +VWCMGGTQH  G
Sbjct: 299 KRRVYGMERIREEVKKYTPEEVENVVGAPKAQMYRVAKMMAETKPGSIVWCMGGTQHHVG 358

Query: 360 NNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTEGSWKHW 419
           N NTR+YCIL+LALGN+G +GGG NIFRGHDNVQGA+D G+  D LPGY+GLT GSW HW
Sbjct: 359 NANTRSYCILQLALGNMGVTGGGTNIFRGHDNVQGASDFGLSFDDLPGYFGLTSGSWAHW 418

Query: 420 ASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQRENIRAMFYWG 479
           A+VW +D +W+ +RFDQG Y G  P  +PGIP SRW DGVLE+K  + Q++NIR  F+WG
Sbjct: 419 ANVWDLDPKWVTSRFDQGEYLGQSPQTSPGIPCSRWHDGVLEDKTKIAQKDNIRLAFFWG 478

Query: 480 HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYLLPATTQFETYGSVTAS 539
            +VN++TRG E+++A+ K+D +V+VDP+PT+A VM+ R DGVYLLPA TQFETYGSV+A+
Sbjct: 479 QSVNTETRGREVRQALDKMDTVVVVDPFPTMAGVMHQRKDGVYLLPAATQFETYGSVSAT 538

Query: 540 NRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGIADQLCKHIRVENNQPLIEDITREFNRG 599
           NRSIQWR +VIEPLFES PDH IM  L++K+GI  +L KHI+V   +PLIEDI RE+NRG
Sbjct: 539 NRSIQWRSKVIEPLFESLPDHVIMCKLAKKVGIDKELFKHIKVNGEEPLIEDIVREYNRG 598

Query: 600 MWTIGYTGQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMPWPCWGTPEMKHPGTHI 659
           MWTIGYTGQSPERLK HQ+NW TF+  +L A GGPA G+TYG+PWPCWGTPEMKHPG+HI
Sbjct: 599 MWTIGYTGQSPERLKMHQENWGTFNVDSLEAPGGPAKGETYGLPWPCWGTPEMKHPGSHI 658

Query: 660 LYDTSKTVAEGGGNFRTRFGVEFEGKSLLAEDSYSKGCELQDGYPEFSDKLLKQLGWWDD 719
           LY+ +K V +GGG+FR RFGVE  G +LL+E++YS G E+QDGYPEF+  +LKQLGWWDD
Sbjct: 659 LYNETKHVKDGGGSFRARFGVERNGVNLLSEEAYSAGSEIQDGYPEFTADMLKQLGWWDD 718

Query: 720 LTAEEKAAAEGKNWKTDLSGGIQRVAIKHGCIPFGNAKARAIVWTFPDRVPLHREPLYTP 779
           LT +EK  AEGKNWKTD+SGGIQRV IKHGCIP+GN KARA+VW FPD +PLHREPLYTP
Sbjct: 719 LTEDEKKYAEGKNWKTDISGGIQRVVIKHGCIPYGNGKARAVVWNFPDDIPLHREPLYTP 778

Query: 780 RRDLLADYPTWDDQAFIFRVPTLYKSIQAQDKSVEYPIILTSGRLVEYEGGGEETRSNPW 839
           RRDL+A YPT++D+  + R+PTLYKSIQ +D + ++P+ LTSGRLVEYEGGGEETRSNPW
Sbjct: 779 RRDLVAKYPTYEDR-MVARLPTLYKSIQDKDFAKDFPLALTSGRLVEYEGGGEETRSNPW 837

Query: 840 LAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKPGMAFLPFHFG 899
           LAELQQEMF+E++P DA D G  DGD V+V   E  +I VKAMVT RV PG  F+P+HF 
Sbjct: 838 LAELQQEMFIEISPADAADRGIRDGDNVFVHSPEGAKITVKAMVTPRVVPGECFMPYHFA 897

Query: 900 GKFQGEDLRPKYPEGTQPYVVGEAANTATTYGYDPVTLMQETKVTLCNIRKA 951
           G F+GE L   YPEGT PYV+GE+ANT  TYGYD VT MQETK +LC I KA
Sbjct: 898 GVFEGESLAKNYPEGTVPYVIGESANTILTYGYDVVTQMQETKSSLCQISKA 949