Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1005 a.a., formate dehydrogenase, alpha subunit, selenocysteine-containing (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  235 bits (599), Expect = 1e-65
 Identities = 192/666 (28%), Positives = 302/666 (45%), Gaps = 130/666 (19%)

Query: 19  ISRRAFMK-NTSLAAGGAAVGASLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCGI 77
           ++RR F+K +   A  GA  G  L     + +A+  ++  + +T    +IC +C+VGCG+
Sbjct: 3   VTRRHFLKLSAGAAVAGAFTGLGLSLAPTVARAELQKLQWAKQTT---SICCYCAVGCGL 59

Query: 78  Y---AEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGERRLKYPMKLE--GGKWKK 132
               A+   G     E   DHP N G  C KGA++ + G  ++R   P+        WK 
Sbjct: 60  IVHTAKDGQGRAVNVEGDPDHPINEGSLCPKGASIFQLGENDQRGTQPLYRAPFSDTWKP 119

Query: 133 ISWEQAINEIGDKALKIREES------------GPDSVYFLGSAKHSNEQAYLFRKMASL 180
           ++W+ A+ EI  +  K R+ S              +++   GSA   NE+ + +  +   
Sbjct: 120 VTWDFALTEIAKRIKKTRDASFTEKNAAGDLVNRTEAIASFGSAAMDNEECWAYGNILRS 179

Query: 181 WGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPVAMQH 240
            G   ++HQARI HS TV  +A ++G GAMTN +ND+ N   +L +GSN AE HP+A + 
Sbjct: 180 LGLVYIEHQARIUHSPTVPALAESFGRGAMTNHWNDLANSDCILIMGSNAAENHPIAFKW 239

Query: 241 ILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWEDKEYIR 300
           +L AK+K +  I V DPR TRT+A+ D +  +R G+D+ F+ G++ ++  N     +Y+R
Sbjct: 240 VLRAKDKGATLIHV-DPRFTRTSARCDVYAPIRSGADIPFLGGLIKYILDNKLYFTDYVR 298

Query: 301 QRV-----------------FGMDEIRAE--------------VAKWTPA---------- 319
           +                    G D    +              V K  PA          
Sbjct: 299 EYTNASLIVGEKFSFKDGLFSGYDAANKKYDKSMWAFELDANGVPKRDPALKHPRCVINL 358

Query: 320 --------EVERVTGV---SEEEVYNTAKTLA----ENRPGCVVWCMGGTQHTTGNNNTR 364
                    +++V  +   S+E++    K  A     ++ G +++ MG TQH+ G  N R
Sbjct: 359 LKKHYERYNLDKVAAITGTSKEQLQQVYKAYAATGKPDKAGTIMYAMGWTQHSVGVQNIR 418

Query: 365 AYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGY-------------YGL 411
           A  +++L LGNIG +GGG N  RG  NVQG+TD G+L+   PGY             Y  
Sbjct: 419 AMAMIQLLLGNIGVAGGGVNALRGESNVQGSTDQGLLAHIWPGYNPVPNSKAATLELYNA 478

Query: 412 TEGSWKHWASVWGVDFEWIKNR------FDQGTYNGALPMET----PGIPVSR------W 455
                K   SV      W +NR      + +  Y    P       P I   R      W
Sbjct: 479 ATPQSKDPMSV-----NWWQNRPKYVASYLKALYPDEEPAAAYDYLPRIDAGRKLTDYFW 533

Query: 456 IDGVLENKDNLQQRENIRAMFYWGHAVNSQTRGV---EMKKAMQKLDMMVIVDPYPTVAA 512
           ++ + E  D    +   + +F WG  +N    G    + +KAM KL+ +V V+ +    +
Sbjct: 534 LN-IFEKMD----KGEFKGLFAWG--MNPACGGANANKNRKAMGKLEWLVNVNLFENETS 586

Query: 513 V------MNDRTDG--VYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMY 564
                  MN    G  V+ LP     E  GSV  S R +QWR +  +P  E+KPD +IM 
Sbjct: 587 SFWKGPGMNPAEIGTEVFFLPCCVSIEKEGSVANSGRWMQWRYRGPKPYAETKPDGDIML 646

Query: 565 LLSQKL 570
            + +K+
Sbjct: 647 DMFKKV 652



 Score = 59.7 bits (143), Expect = 9e-13
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 26/156 (16%)

Query: 806  IQAQDKSV---EYPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFM 862
            I+ + K+V    YP I T+ R+ E+   G  TR   WL E + ++F E++ + A   G  
Sbjct: 864  IEGEKKAVCDPRYPFIGTTYRVTEHWQTGLMTRRCAWLVEAEPQIFCEISKELAKLRGIG 923

Query: 863  DGDMVWVEGAEKGRIKVKAMVTRRVKP--------GMAFLPFHFGGKFQGEDLRPKYPEG 914
            +GD V V    +G ++  A+VT R++P         M  LP+H+G               
Sbjct: 924  NGDTVKVSSL-RGALEAVAIVTERIRPFKIEGVDVHMVGLPWHYGWMV------------ 970

Query: 915  TQPYVVGEAANTATTYGYDPVTLMQETKVTLCNIRK 950
              P   G+ AN  T    DP T + ETK  + ++RK
Sbjct: 971  --PKNGGDTANLLTPSAGDPNTGIPETKAFMVDVRK 1004