Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 933 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  233 bits (594), Expect = 4e-65
 Identities = 160/540 (29%), Positives = 260/540 (48%), Gaps = 49/540 (9%)

Query: 51  QASEVDRSAKTEVKRTICSHCSVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALR 110
           +A + D     +   +IC  C VGC +  +V++G     +   + P N G  C KG    
Sbjct: 222 EAQQGDSKDFDDEVSSICPFCGVGCQVSLKVKDGAIVKAD-GINGPANEGRLCVKGRFGF 280

Query: 111 EHGHGERRLKYPMKLE------------GGKW---KKISWEQAINEIGDKALKIREESGP 155
           ++ H   RL  P+               G  W   ++ +WE+A++        +R   G 
Sbjct: 281 DYIHHPHRLTKPLIRRDDAPEKGLNVDPGNPWTHFREATWEEALDAAAHGLGDLRSFYGG 340

Query: 156 DSVYFLGSAKHSNEQAYLFRKMA-SLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSF 214
            SV   GSAK +NE+AYLF+K+    +G NNVDH  R+CH+++VA +    G GA+T +F
Sbjct: 341 KSVAGFGSAKCTNEEAYLFQKLIRQAFGHNNVDHCTRLCHASSVAAMMENIGSGAVTATF 400

Query: 215 NDMHNCKSMLFIGSNPAEAHPVAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRP 274
           N++ N    + IG+NP E HPVA        ++   +++V DPR       A + +  RP
Sbjct: 401 NEIENADVAIVIGANPTENHPVAATFFKQFAKRGG-ELIVLDPRGQALKRHAAHMLQFRP 459

Query: 275 GSDVAFIWGVLWHVFKNNWEDKEYIRQRVFGMDEIRAEVAKWTPAEVERVTGVSEEEVYN 334
           G+DVA + G++  + +    D++YI     G  E R  +  +TP  +  + G+   ++  
Sbjct: 460 GTDVALLNGIMNVIVEEKLYDRQYIEGFTEGFFEFREHIRAFTPERMAELCGIEAAQIRA 519

Query: 335 TAKTLAENRPGCVVWCMGGTQHTTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQG 394
            A++ A  R G + W MG +QH  G +N R    L L  G++G+ G G +  RG +NVQG
Sbjct: 520 VARSFARARAGMIFWGMGVSQHIHGTDNARCLISLALLCGHVGRPGTGLHPLRGQNNVQG 579

Query: 395 ATDLGVLSDTLPGYYGLTEGSWKH-WASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVS 453
           A+D G++   LP Y  +T+   +  +  +W            +GT   A    TPG+ V 
Sbjct: 580 ASDAGLIPQVLPDYQNVTDPEVRELFRHIW------------KGTQIDA----TPGLTVV 623

Query: 454 RWIDGVLENKDNLQQRENIRAMFYWGHAVNSQTRGVE-MKKAMQKLDMMVIVDPYPTVAA 512
             +D V         R  IR M+  G         VE  +KA+  LD +V+ D + T  A
Sbjct: 624 EIMDRV--------YRGEIRGMYILGENPAMSDPDVEHARKALAHLDHLVVQDIFLTETA 675

Query: 513 VMNDRTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGI 572
              D      +LPA+   E  G+VT +NR +Q   + ++   E++ D  I+  ++ +LG+
Sbjct: 676 NYAD-----VILPASAFPEKTGTVTNTNRQVQMGRKAVDAPGEAREDWRIIVDMANRLGL 730



 Score = 45.8 bits (107), Expect = 1e-08
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 1/84 (1%)

Query: 815 YPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEK 874
           YP+ILT+GR +E+   G  TR    L  ++ E    ++PK    LG   G  V +    +
Sbjct: 810 YPMILTTGRQLEHWHTGSMTRRASVLDAVEPEANCSLHPKTLRKLGVEPGGHVRLT-TRR 868

Query: 875 GRIKVKAMVTRRVKPGMAFLPFHF 898
           G I V A   R V   M FLPF +
Sbjct: 869 GTITVMARADRAVAEDMVFLPFAY 892