Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1432 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  254 bits (648), Expect = 4e-71
 Identities = 182/619 (29%), Positives = 300/619 (48%), Gaps = 79/619 (12%)

Query: 61   TEVKR--TICSHCSVGCGIYAEVQNGVWTGQ--EPAFDHPFNAGGHCAKGAALREHGHGE 116
            TE+K   TIC++C VGC +  ++       +  E   D   N G  C KG    +  H +
Sbjct: 737  TELKTASTICTYCGVGCRLDLKIDPNANRIRHIEGNKDSVVNQGMLCVKGRFGFDFIHSD 796

Query: 117  RRLKYPMKLEGGKWKKISWEQAINEIGDKALKIREESGPDSVYFLGSAKHSNEQAYLFRK 176
            +RL  P+  + G+ +  SW +AI  +  +  +I+++ G +++  L SAK +NE  ++ +K
Sbjct: 797  KRLTTPLIRKNGELQPSSWPEAIAYVAKRLTEIKQKDGSNALASLASAKATNEDNFVLQK 856

Query: 177  MA-SLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHP 235
               S+ GTNN+DH AR+CHS+TV G+  + G GAMTN    + +   +  +GS+   AHP
Sbjct: 857  FVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKDSDVIFILGSDTTCAHP 916

Query: 236  VAMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNWED 295
            +    I  A  ++  +++VADP+R   A KA+ +V+ RPG+DV  +  ++  + +++W+D
Sbjct: 917  IIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAHRPGTDVMLLNAIMAEIIRHDWQD 976

Query: 296  KEYIRQRVFGMDEIRAEVAK--WTPAEVERVTGVSEEEVYNTAKTLAENRPGCVVWCMGG 353
            K YI +R  G++ + AE+AK  ++      +TGV  E++   A+T+       V + MG 
Sbjct: 977  KAYIAERTEGIEALYAELAKDDYSLENAALITGVKAEDIARLARTIGTAEKTAVYYAMGI 1036

Query: 354  TQHTTGNNNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTE 413
            TQHTTG++N  A   L+L  GNIG SG G N  RG  NVQGA D+G L +   GY  +T+
Sbjct: 1037 TQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTD 1096

Query: 414  GSWK-----HWASVWGVDFEWIKNRFDQGTYNGALPMETPGIPVSRWIDGVLENKDNLQQ 468
               +     HW                Q   +G +     G+  +  +  + + K     
Sbjct: 1097 LHARMRFENHW----------------QTRLSGEI-----GVTATHMMHDIAKGK----- 1130

Query: 469  RENIRAMFYWG-HAVNSQTRGVEMKKAMQKLDMMVIVDPYPTVAAVMNDRTDGVYLLPAT 527
               I+A++  G + V S      +  A+ +++ +V+ D + T  A +        +LPA 
Sbjct: 1131 ---IKALYVMGENPVLSDPDQAHVLNALSQIEFLVVQDIFLTETAEL-----AHVVLPAA 1182

Query: 528  TQFETYGSVTASNRSIQWRDQVIEPLFESKPDHEIMYLLSQKLGIADQLCKHIRVENNQP 587
               E  G  T + R +Q  +Q +    E+ PD +I+  ++  +G                
Sbjct: 1183 AFVEKRGHFTNTERRVQRLEQALASPGEALPDWQIVQAVANAMGANWDYTNE-------- 1234

Query: 588  LIEDITREFNRGMWTIGYTGQSPERLKTHQQNWHTFHKTTLAAEGGPAHGDTYGMPWPCW 647
              E I RE N    T  Y G   +RL  +             AEG  +     G+ WPC 
Sbjct: 1235 --EAIWREINE--LTPQYRGIRWDRLSAN-------------AEGQISQ----GIQWPC- 1272

Query: 648  GTPEMKHPGTHILYDTSKT 666
              P+  HPGT I++ +  T
Sbjct: 1273 --PDETHPGTPIMHQSQFT 1289



 Score = 63.5 bits (153), Expect = 9e-14
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 26/150 (17%)

Query: 800  PTLYKSIQAQDKSVEYPIILTSGRLVEYEGGGEETRSNPWLAELQQEMFVEVNPKDANDL 859
            P  Y+ + A+    EYP+ L++GRL+E    G  TR  P L +L     V ++  DA  L
Sbjct: 1297 PVSYR-LPAEMPCNEYPLTLSTGRLLEQFHTGTLTRKTPGL-DLLGAPKVMISVYDAEQL 1354

Query: 860  GFMDGDMVWVEGAEKGRIKVKAMVTRRVKPGMAFLPFHFGGKFQGEDLRPKYPEGTQPYV 919
            G  +GD + +    +G I++ A VT+R + G+ FLPFHF                     
Sbjct: 1355 GINNGDKLRLT-TRRGEIEIDAFVTKRAQAGVLFLPFHF--------------------- 1392

Query: 920  VGEAANTATTYGYDPVTLMQETKVTLCNIR 949
            V  AAN  T    DPV  + E KV  C +R
Sbjct: 1393 VEAAANKLTINALDPVAYIPEYKV--CAVR 1420