Pairwise Alignments

Query, 951 a.a., formate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 1005 a.a., formate dehydrogenase alpha subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (586), Expect = 4e-64
 Identities = 277/1085 (25%), Positives = 436/1085 (40%), Gaps = 235/1085 (21%)

Query: 19   ISRRAFMKNTSLAAGGAAVGA-SLFTPGMIRKAQASEVDRSAKTEVKRTICSHCSVGCGI 77
            ++RR F K  ++ A  + + A  L +       +  ++ R+ +T   R  C +CSVGCG+
Sbjct: 1    MNRRQFFKLCAVGAATSTISALGLMSEKAFASVRGFKLLRAKET---RNNCCYCSVGCGL 57

Query: 78   --YAEVQNGVWTGQ-----EPAFDHPFNAGGHCAKGAALREHGHGERRLKYP-MKLEGG- 128
              Y++  NG    Q     E   D+P N G  C KGA L ++ +   RLKYP ++L G  
Sbjct: 58   LMYSQSSNGKNAEQSIFHIEGDADNPINRGALCPKGAGLVDYVNSPHRLKYPEVRLPGSD 117

Query: 129  KWKKISWEQAINEIG-------DKALKIREESGPD-----SVYFLGSAKHSNEQAYLFRK 176
            KW++ISW++A   I        D  L  +   G       S+  + S+  +NE  Y+  K
Sbjct: 118  KWQRISWDEAFKRIARLIKDERDANLVEKNAQGQTVNRLVSLGMMTSSAQANEGCYITHK 177

Query: 177  MASLWGTNNVDHQARICHSTTVAGVANTWGYGAMTNSFNDMHNCKSMLFIGSNPAEAHPV 236
                 G   +D+ AR+CH+ T A +A T+G GAMTN + DM N    + +G N AEAHPV
Sbjct: 178  FGRAIGMLGIDNIARVCHAPTPAAMAPTFGRGAMTNHWADMKNTDLAIVMGGNAAEAHPV 237

Query: 237  AMQHILIAKEKNSCKIVVADPRRTRTAAKADYFVSLRPGSDVAFIWGVLWHVFKNNW--- 293
                +  A E N+ K++V DPR  R+AA AD +  +R G+D+AF+ G++ ++ +      
Sbjct: 238  GFGWVTEAMEHNNAKLIVVDPRFNRSAAVADLYAPIRSGTDIAFLLGMIRYLLETQQINL 297

Query: 294  --------------EDKEYIRQRVFGMDE------------------------------- 308
                          ED E+      G DE                               
Sbjct: 298  NYVKAYTNATFIVREDFEFNDGLFSGYDEANHKYDQSTWFYELDEEGYAKVDPSLSHPRC 357

Query: 309  ----IRAEVAKWTPAEVERVTGVSEEEVYNTAK----TLAENRPGCVVWCMGGTQHTTGN 360
                ++  V ++ P  V  +TG  +E      +    T  +++    ++ +G TQH+ G 
Sbjct: 358  VINLLKKHVDRYDPYTVSSITGTPKEAYLEVCQQIGATHVDHKAATFLYALGWTQHSVGA 417

Query: 361  NNTRAYCILELALGNIGKSGGGANIFRGHDNVQGATDLGVLSDTLPGYYGLTE------- 413
             N R   +++L LGN+G  GGG N  RGH NVQGATDLG+L   LPGY  L +       
Sbjct: 418  QNIRTMAMIQLLLGNMGIMGGGVNALRGHSNVQGATDLGLLCQGLPGYLKLPQDRDVDLQ 477

Query: 414  -------------GSWKHWASVWGVDFEWIKNRFDQGT-------YNGALPMETPGIPVS 453
                             +W +        +K  F +         YN  LP       ++
Sbjct: 478  NYLAHYTPKALRPNQTNYWHNYPAFTVSLLKAFFGEHATAENDYGYNW-LPKWDQQYDIN 536

Query: 454  RWIDGVLENKDNLQQRENIRAMFYWGHAVNSQTRGVEMKKAMQKLDMMVIVDPYPTV--- 510
            + ID ++  + N    + I       +A+NSQ    ++ K +  L  +V++D        
Sbjct: 537  KQIDMMVHGEVNGYFIQGI-------NALNSQPDKQKVSKGLSNLKFLVVLDALANETSS 589

Query: 511  ----AAVMND------RTDGVYLLPATTQFETYGSVTASNRSIQWRDQVIEPLFESKPDH 560
                A   ND      +T+ V+ LP T   E  GS+  S+R +QW  +   P  E+  D 
Sbjct: 590  FWRNAGQFNDVDTASIQTE-VFRLPTTCFAEESGSIANSSRWLQWHFKGANPPGEALSDP 648

Query: 561  EIM--YLLSQK---------LGIADQLCKHIRVENNQPLIEDITREFNRGMWTIGYTGQS 609
             I+   +L  K         L    +  K      ++P  E+I RE N    T G     
Sbjct: 649  AILSGIMLELKRLYREEGGRLPAPIEAIKWDYAIEHEPSSEEIAREMNGYDLTTGKLLNG 708

Query: 610  PERLKT----------HQQNW----HTFHKTTLAAEGGPAHGDTYGMPWPCWGTPEMKHP 655
               LK+          +   W    +   +   +   G      +   WP          
Sbjct: 709  FSELKSDGSTSCGIWVYSGMWTEAGNLMARRDNSDPSGKGITPNWSFAWPA--------- 759

Query: 656  GTHILYDTSKTVAEGGGNFRTRFGVEFEGKSLLAEDSYSKGCELQDGYPEFSDKLLKQLG 715
               ILY+ +    +G     +R  +E+       +D+  +G ++    P+F+ K      
Sbjct: 760  NRRILYNRASCDVQGKPRDPSRVLLEY-------KDNKWQGIDV----PDFNAK------ 802

Query: 716  WWDDLTAEEKA-----AAEGKNWKTDLSGGIQRVAIKHGCIPFGNAKARAIVWTFPDRVP 770
                L AEE A      A+G      L        +K G  PF                P
Sbjct: 803  ----LNAEESAHPFIMQADGVGHLFALRD------LKDG--PF----------------P 834

Query: 771  LHREPLYTPRRDLLADYPTWDDQAFIFRVPTLYKSI-QAQDKSVEYPIILTSGRLVEYEG 829
             H EP  +P    LA  P    +     V  ++K + ++   + E+P + T+  + E+  
Sbjct: 835  EHYEPFESP----LASNPL-HPKVTNNPVARMFKGLRESFGTNEEFPYVGTTYSMTEHFN 889

Query: 830  GGEETRSNPWLAELQQEMFVEVNPKDANDLGFMDGDMVWVEGAEKGRIKVKAMVTRRVKP 889
                T      A  Q + F+E++   A + G  +GD V V  +++  I  KA VT+R++P
Sbjct: 890  NW--TTHCHLAAITQPQHFIEIDETLAAEKGINNGDWVKV-SSKRSHIVTKAYVTKRLQP 946

Query: 890  GMAFLPFHFGGKFQ--GEDLRPKYPEGTQ-PYVVGEAANTATTYGYDPVTLMQETKVTLC 946
             M       G K    G      Y   TQ  Y+V E  ++      D  T   E K  L 
Sbjct: 947  MMV-----QGKKVHTIGIPRHGSYEALTQKSYIVNELTSSVG----DANTQTPEYKAFLV 997

Query: 947  NIRKA 951
            NI KA
Sbjct: 998  NIAKA 1002