Pairwise Alignments

Query, 357 a.a., formate dehydrogenase subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., formate dehydrogenase, gamma subunit (RefSeq) from Shewanella loihica PV-4

 Score =  203 bits (516), Expect = 6e-57
 Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 3/285 (1%)

Query: 53  WRQVRQGEAGYTTSQSPEHGVLISKPGETWFILKEKWMSPAGAVAIFGSIAMVVLAYIAV 112
           W +++ G  GYTTS    H   I+        L+  W++PA   A+FG I + VL     
Sbjct: 43  WSEIQAGATGYTTSHGQFHNQPINSYDLRVLELRSDWLAPALMAALFGMIIIFVLFIKVN 102

Query: 113 GPLMLSKPRTGRKLNRWSRSDRALHWSMAFTFLTLAFSGLMLVYGKHFLKPYIPSELWGW 172
           G   L    +G+ + RWS+ D ++HW  A   L L  +GL L+ G+ F +PY+    W  
Sbjct: 103 GISKLHHGFSGKMVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYLGEGFWAG 162

Query: 173 IIYAAKQYHNYMGPLFFILLMFVLLKWWRKSIFNKVDVQWFMKLGGMV--GKYKGTHPSA 230
           ++Y AKQ H+YM   F I    +   W +  +    DV+WF+ +GG +  G +KG HP A
Sbjct: 163 LVYGAKQIHDYMAIPFMIGWALMTTLWAKNQLPKMYDVKWFLVVGGYINFGPFKGKHPDA 222

Query: 231 GFSNAGEKAIYWLLIVFGTFAAISGLVLDFPIFGQTRRDMELSNLI-HMLSALILICGFI 289
           GF+NAGEK  +W    FG   + SG++L FP   +  R + L  L+ H +SA+++    I
Sbjct: 223 GFANAGEKMWFWAFAFFGLIISASGMLLLFPNLFEPSRTLSLIALVLHSVSAIVICAFSI 282

Query: 290 FHIYIGLFGMEGALEGMVTGKVDETWAKEHHDLWYEEVKRRGEIE 334
            HI++     EG +E MV+G  DE WA +HH+LWY+E+K  G ++
Sbjct: 283 VHIFMATVMSEGGMECMVSGYCDENWATQHHNLWYDEIKANGTLK 327