Pairwise Alignments

Query, 357 a.a., formate dehydrogenase subunit gamma from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., formate dehydrogenase, gamma subunit (RefSeq) from Shewanella loihica PV-4

 Score =  245 bits (626), Expect = 1e-69
 Identities = 122/335 (36%), Positives = 194/335 (57%), Gaps = 6/335 (1%)

Query: 1   MAMRQQLSRATRFVLPLLAALLCWLAQPVMAEENAKPDVVQKEMTQLAGADFWRQVRQGE 60
           M ++   S  T  +LPL+ A+   L     A +    +   ++M   + A+ WR V+ G+
Sbjct: 1   MLLKSLRSLFTVLLLPLVLAMGLGLTTSAYAVD----EQTSQQMANTSDAELWRAVKSGD 56

Query: 61  AGYTTSQSPEHGVLISKPGETWFILKEKWMSPAGAVAIFGSIAMVVLAYIAVGPLMLSKP 120
            GYTT++  E GV+I+        +K  +++P  A+A+ G     ++ Y+  GP  LS  
Sbjct: 57  KGYTTAKGAEGGVMINVSAIEGTNVKNDYLTPVMALAVCGVFGAFLIFYLVNGPSKLSHG 116

Query: 121 RTGRKLNRWSRSDRALHWSMAFTFLTLAFSGLMLVYGKHFLKPYIPSELWGWIIYAAKQY 180
            +G+ + RWS++D  +HW MA + L L F+GL ++ GKH L+PY+ + +WG +IY +K  
Sbjct: 117 FSGKMVLRWSKADLWIHWVMALSCLALIFTGLNIMLGKHVLQPYVGTGIWGSLIYGSKTI 176

Query: 181 HNYMGPLFFILLMFVLLKWWRKSIFNKVDVQWFMKLGGMV--GKYKGTHPSAGFSNAGEK 238
           H+Y GPLF +     ++KW     F   D++WF+ +GG +  G +KG HP +GF+NAGEK
Sbjct: 177 HDYAGPLFIVAWAICVVKWMPLQTFKLYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEK 236

Query: 239 AIYWLLIVFGTFAAISGLVLDFPIFGQTRRDMELSNLIHMLSALILICGFIFHIYIGLFG 298
             +W L +FG F A+SG++L  P     R     + L+H LSA+I+I   I HI++    
Sbjct: 237 MWFWTLTLFGLFIAVSGIMLVMPALELPREASMAALLVHGLSAIIIIAFTIVHIWMATVL 296

Query: 299 MEGALEGMVTGKVDETWAKEHHDLWYEEVKRRGEI 333
            EG +E M +G  DE WA +HH+LWY+E+K  G +
Sbjct: 297 SEGGMECMKSGYCDENWAVQHHNLWYDEIKDNGTL 331