Pairwise Alignments

Query, 449 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  319 bits (817), Expect = 1e-91
 Identities = 161/445 (36%), Positives = 265/445 (59%), Gaps = 3/445 (0%)

Query: 2   ITVQQQDAATLTIVSQMTGSKELDLNLYLFIPGELDISPEVISESEFFYSSIHQQRAYYS 61
           I V+Q+++ ++    QM       L+LY F+P E+ I    ++E E+++S I  +R+YYS
Sbjct: 4   IRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGAHTLNEEEYYHSGIVGRRSYYS 63

Query: 62  DQILLPLVHSRLAQRGHLSTTQYRVSLSLFAYQYVIALDKAVSQLNNTSDTVTAE-EVDS 120
           + + LPLV  R A     +  ++R+ L+LFAYQ+ +A++  V +LN  +D       +D 
Sbjct: 64  EGLHLPLVQGRFASMNRRTVEEFRLYLNLFAYQFAVAVENDVKELNRIADVEHFYLALDE 123

Query: 121 VIELSLDILRRLRRSIPYEEQLKRYYANIDNYLSWYTEQSFLSMIAHMTRDNEYKTIKDR 180
           + E    +L++ RR+ P + + K Y+ N DNYLSW+ EQ  L ++AH TR +++  I++R
Sbjct: 124 LCEQITQLLKKFRRNEPGDPKWKSYFENADNYLSWFCEQQLLKVLAHATRTSDFSDIQER 183

Query: 181 LITLVEKEQAHRTLNQYNSDKANHDITRLSNKMRLLRRLIEHPVILNEKVSSLGNNTKRA 240
           ++TL   E A+R  N YNS +   D  R+SNKM LLRRLI+  V+L E++  LG   K+ 
Sbjct: 184 VLTLCRNESAYRDANNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGLKKF 243

Query: 241 VKGLATGLVMVAVTITAISARDYWGEITASFIIAMSFIYALREIFKDDLRDMLWRWISKG 300
             GLAT LVM+ V+   I A+  +   T + ++ ++ IY  REIFKDD+R+ LWR+I +G
Sbjct: 244 TTGLATALVMLVVSALIIEAQGVFSGFTIALVLTLAVIYGFREIFKDDVRNALWRFIQRG 303

Query: 301 KAKWRRHYFDPTTGKQVGDKEEWLDYKKLSELPDRIQAIRKKRIVQR--EEQILHYRSHT 358
           + +W R   D T+   +  +  WL++ +  +LP+++  I K R  Q   + +ILHY+  T
Sbjct: 304 RPRWSRILRDTTSQAVIAKQLVWLEFMRQQDLPEKVSEILKHRHSQNKVDAEILHYKIAT 363

Query: 359 EMSTSRFMSGYEETRETMMIDLRAIMRQMDKGSNHIYQLNNGQVSRESVEKRHLLNLIAK 418
            ++   F +GY   +E +        R +++G   IY+   G++S ESVE+R+ +NLI  
Sbjct: 364 RVNQGEFQAGYSTIQEQVNFSFVPFARYLERGKAKIYKELEGKISHESVERRYQVNLILV 423

Query: 419 EKHHKGEPTYYRWKIVLNRSRIVDI 443
            +  + EP Y R+KI +NRS I++I
Sbjct: 424 LRDGREEPEYARYKITMNRSAIIEI 448