Pairwise Alignments

Query, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., FIG00953341: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

 Score =  275 bits (704), Expect = 6e-79
 Identities = 139/279 (49%), Positives = 191/279 (68%), Gaps = 3/279 (1%)

Query: 1   MINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGI--EIGQFIDVFLYFDSENQ 58
           M  +G+ NSL+VVK   FG++LD G  G  LLP R++P+ I  E   +++VF+Y DS+++
Sbjct: 1   MALVGRYNSLQVVKHTNFGLYLDGGADGEILLPNRYIPKDIPSEDEDWLNVFIYLDSDDK 60

Query: 59  LAATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYV 118
           L ATTE P  QVGE+  +K+  VNS G F +WG+  KDLL+PYSE++ + TAG+  +V+V
Sbjct: 61  LIATTEKPKVQVGEFASLKVVEVNSIGVFLDWGLP-KDLLLPYSEEKRQMTAGEYCVVHV 119

Query: 119 YTDKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSD 178
           Y DK + RI  T + +++LDKTPA YTP Q+VDLL+AE +++GFKAI+N  HWG+I  ++
Sbjct: 120 YLDKHTRRITATARLDRYLDKTPANYTPGQEVDLLVAEATDMGFKAIINNKHWGLIHKNE 179

Query: 179 VFGKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILETLEKKGGFLPLSDKS 238
           +F  +  G + KG+IK +R DGKI LSLQ VG E    L+ KIL  L +  G L +SDKS
Sbjct: 180 IFKFMRAGMQEKGFIKEIRPDGKISLSLQPVGQEAATSLNAKILAKLRENNGTLAVSDKS 239

Query: 239 TPEAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRLA 277
            P  I + F  SKG FKK IG LYK G+IVI  D I L+
Sbjct: 240 DPALISSLFGVSKGNFKKAIGALYKNGQIVIHADRIELS 278