Pairwise Alignments

Query, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  273 bits (699), Expect = 2e-78
 Identities = 138/276 (50%), Positives = 192/276 (69%), Gaps = 1/276 (0%)

Query: 1   MINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIEIGQFIDVFLYFDSENQLA 60
           MI +G+   L VVK   FG +L+AG++G  LLP +F P+ +++G  +DVFLY DSE+   
Sbjct: 1   MIQLGKTCRLAVVKQVNFGFYLNAGDFGQVLLPNKFAPDNLQVGDELDVFLYLDSEDTPI 60

Query: 61  ATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYVYT 120
           ATT+ P+AQVGE+  +KI  V+  GAF +WG+ +KDLL+P++EQ      G+  LV+++ 
Sbjct: 61  ATTQKPLAQVGEFANLKIVSVSRVGAFLDWGL-DKDLLLPFAEQTRPPEEGKYQLVHLHI 119

Query: 121 DKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSDVF 180
           ++A  RIV + K +K+LDKTPA Y P Q+V L+IA R++LG+KAI+N +HWG+I  SDVF
Sbjct: 120 NRADDRIVASAKLDKFLDKTPASYKPGQEVKLVIAGRTDLGYKAIINDSHWGLIHQSDVF 179

Query: 181 GKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILETLEKKGGFLPLSDKSTP 240
             L  G KLKGYIK VR DGKIDL L K   +++D  S  IL+ L+  GGFLPL DK+  
Sbjct: 180 KPLRAGNKLKGYIKQVRHDGKIDLVLNKGTRDELDAHSGVILKKLQAAGGFLPLGDKTDA 239

Query: 241 EAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRL 276
           + I+     SK  FKK+IGGL+KQGK+ I +DG+ L
Sbjct: 240 DVIYTELGMSKKAFKKSIGGLFKQGKLRITDDGLYL 275