Pairwise Alignments

Query, 277 a.a., GntR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (694), Expect = 9e-78
 Identities = 133/276 (48%), Positives = 192/276 (69%), Gaps = 1/276 (0%)

Query: 1   MINIGQINSLEVVKFAEFGVFLDAGEYGTTLLPKRFVPEGIEIGQFIDVFLYFDSENQLA 60
           MI IG+  +LE+VK  +FGV+L+A E+G  LLP +  P+G E+G  ++VFLY DSE+ + 
Sbjct: 1   MIEIGKRCTLEIVKRVDFGVYLNAHEFGQVLLPNKVAPQGCEVGDSVEVFLYLDSEDMVI 60

Query: 61  ATTETPIAQVGEWGLMKIEGVNSTGAFANWGIKNKDLLIPYSEQRARFTAGQTVLVYVYT 120
           ATT+ P AQVG++  +K       GAF +WG+ +KDL++P+ EQ      G++ LVYVY 
Sbjct: 61  ATTKRPKAQVGQFAYLKAVATGPYGAFLDWGL-DKDLMLPFGEQHREIEVGRSYLVYVYV 119

Query: 121 DKASGRIVGTTKFNKWLDKTPAKYTPNQQVDLLIAERSELGFKAIVNGTHWGMIFSSDVF 180
           + A  RIV ++K +K+LD+TP  Y   Q+V L+IA  ++LG+KAI++  HWG+++ ++V+
Sbjct: 120 NSADDRIVASSKIDKFLDRTPPPYRNGQEVSLIIAGTTDLGYKAIIDNGHWGVLYKNEVY 179

Query: 181 GKLFIGKKLKGYIKSVREDGKIDLSLQKVGVEKMDELSTKILETLEKKGGFLPLSDKSTP 240
             L  G+++KG+IK VR D KIDL LQ+   E++D+ +T IL  L + GGFLPL+DK+  
Sbjct: 180 QPLKFGQRIKGFIKRVRSDDKIDLILQRGAKEELDKHATAILMKLNQAGGFLPLTDKTDA 239

Query: 241 EAIFATFRTSKGTFKKTIGGLYKQGKIVIENDGIRL 276
           E I+A    SK  FKK+IGGLYKQ KI IE DGIRL
Sbjct: 240 EVIYAELAMSKKAFKKSIGGLYKQQKIAIEADGIRL 275