Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., NOL1/NOP2/SUN family signature protein from Sinorhizobium meliloti 1021

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 89/297 (29%), Positives = 135/297 (45%), Gaps = 20/297 (6%)

Query: 26  LRNSLVHPNISLPEPFIASMAKILPDPTQLADFIAACQRPLRKSIRVNTLKISVAEFCQR 85
           L ++ +H    +PE    S  +   D   LA+  A   RP    +RVNTLK +  E   +
Sbjct: 115 LEDAPLHVQGDIPEWTQGSFEENFSDDW-LAEAKALAGRPTL-DLRVNTLK-ATREKVLK 171

Query: 86  AAEKEWQLTPVPWCENGFWIDADESLVPLGNTAEHMA---GLFYIQEASSMMPVSALFMG 142
           A E+     P     +G  I A E    L N    ++   G F +Q+  S +       G
Sbjct: 172 ALERSGA-EPAAIARHGVRIPAGEGASRLPNVTAEISFQKGWFEVQDEGSQIVADLALPG 230

Query: 143 NAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSN 202
            A  + VLD  A  G KT  MAA M+N+G + A +    R+  +   ++R G RN  +  
Sbjct: 231 EA--EQVLDYCAGGGGKTLAMAAAMNNKGQVHAYDADRKRLAPIIERLKRAGTRNVQVHE 288

Query: 203 FDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQ 262
               +    L  R D VL+DAPC+G GT R+ PD     + ++++     Q+  +  A Q
Sbjct: 289 STESLTS--LIGRVDRVLVDAPCTGTGTWRRRPDTKWRLTQKNLEERLAQQEEALAGAAQ 346

Query: 263 ALKVGGTLVYSTCTLSREENQQVCWHLKQTYG---DAVSFESLGNLFEHASLALTEE 316
            ++ GG L+Y TC++  EEN+       Q YG   D   FE L      A+L  T++
Sbjct: 347 FVRPGGHLIYVTCSVLPEENE------AQVYGFCEDNPEFEVLSAADNWAALFGTDK 397