Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., sun protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 9/190 (4%)

Query: 149 VLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVF 208
           VLD  AAPG K+  +  L D +  LVA +F   R++ +  N+ER  +    +    G + 
Sbjct: 244 VLDACAAPGGKSCHLLELADIE--LVAVDFDQKRLERVSQNLERLKLDARVIHGDAGDIG 301

Query: 209 GGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGG 268
             W   +FD +L+DAPCS  G IR+ PD         I  +A  Q+ ++++ +Q LK GG
Sbjct: 302 SWWQGGKFDRILLDAPCSATGVIRRHPDIKWLRQNNDIAELAKLQQQILDNCWQWLKPGG 361

Query: 269 TLVYSTCTLSREENQQVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDC 328
           TL+Y+TC++  EEN++      +   DA + E+L N   +  +         I P   D 
Sbjct: 362 TLLYATCSILPEENREQIKAFLERTPDA-TLETLPNQANNNDIG------WQILPGQDDM 414

Query: 329 EGFFVAKIRK 338
           +GF+ A+++K
Sbjct: 415 DGFYYARLKK 424