Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., tRNA and rRNA cytosine-C5-methylase (NCBI) from Rhodospirillum rubrum S1H

 Score = 80.9 bits (198), Expect = 9e-20
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 13/221 (5%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDS-VLDMAAAPGSKTTQMAALMDNQGVLV-ANEFSA 180
           G +++Q+A++ +PV  L  G     + V+D  AAPG KT Q+AA     G  V A + SA
Sbjct: 217 GQWWVQDAAAALPV--LLAGVPLKGARVVDFCAAPGGKTLQLAAA----GAQVWAVDRSA 270

Query: 181 SRVKVLHANIERCGIRNTA-LSNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMK 239
           +R+  L  N+ER G+ +   +   D   F     ++ D VL+DAPC+  GT R+ PDA  
Sbjct: 271 TRLARLRENLERTGLGDAVNVVEGDALTFTLTDGQQADVVLVDAPCTATGTFRRHPDAPW 330

Query: 240 NWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSF 299
                   ++A  Q +L+++A + ++ GG +VY  C+L  EE       L     +    
Sbjct: 331 LKRPGDAAALAALQDSLLDAAVRLVRPGGVIVYCVCSLQPEEAAPRIEALLARSPEISRK 390

Query: 300 ESLGNLFEHASLALTEEGFLHIFPQMYDC----EGFFVAKI 336
                    +   +T EG + +FP   D     +GFF+A++
Sbjct: 391 PITAGEGGVSDEMITAEGDVRLFPFHLDAVGGLDGFFIARL 431