Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., SAM-dependent methyltransferase from Ralstonia solanacearum GMI1000

 Score =  105 bits (262), Expect = 3e-27
 Identities = 79/278 (28%), Positives = 126/278 (45%), Gaps = 8/278 (2%)

Query: 65  PLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTAEHMAGL 124
           P    +RVNTLK          A+   +  P P    G  +    +L  L        G 
Sbjct: 193 PAPLDLRVNTLKGERDAVLATLAQAGIEGAPAPLSPVGIRLAGKPALNKLDIFTN---GT 249

Query: 125 FYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVK 184
             +Q+  S +    L    +  + V+D  A  G KT  + A M + G L A + S  R+ 
Sbjct: 250 VEVQDEGSQLLCQLLAPKRS--EMVVDFCAGAGGKTLAIGAAMRSTGRLYAFDISEKRLA 307

Query: 185 VLHANIERCGIRNTALSNFDG--CVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWS 242
            L   + R G+ N   +  D         L  + D VL+DAPCSG GT+R++PD     S
Sbjct: 308 NLGPRLARSGLSNVHPARIDSEHDAKVKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQS 367

Query: 243 LESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFESL 302
            ++++ ++  Q +++ SA + LK GG LVY+TC++   ENQQV       + D V   + 
Sbjct: 368 AQAVEEMSAKQLSILASAARLLKAGGRLVYATCSVLARENQQVVEQFLAQHADFVLVPA- 426

Query: 303 GNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRKLA 340
           G       + L    +L ++P ++  +GFF A + + A
Sbjct: 427 GEALAAQKIPLEMGPYLELYPHVHQTDGFFAAVLERRA 464