Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., putative ribosomal RNA small subunit methyltransferase B from Phaeobacter inhibens DSM 17395

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G +++Q+A++ +P   L       +SVLD+ AAPG KT Q+AA   N   + A + SA R
Sbjct: 209 GDWWVQDAAAALPAQILAAKPG--ESVLDLCAAPGGKTMQIAAAGAN---VTAVDQSAGR 263

Query: 183 VKVLHANIERCGIRNTALSNFDGCVFGGWLPE--RFDAVLIDAPCSGEGTIRKDPDAMKN 240
           +  L  N+ER G+  T        V G  L +  ++DAVL+D+PCS  GTIR+ PD    
Sbjct: 264 MARLSENLERTGLEATV-------VVGDALEQTGQYDAVLLDSPCSATGTIRRHPDLPHA 316

Query: 241 WSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFE 300
                  ++   Q  ++  A+  +K GG L+Y TC+L  +E +       + + D    +
Sbjct: 317 KDGSGFGALIELQAQMLAHAWSLVKPGGRLIYCTCSLLPDEGECQVEDALEMFPDMSVGD 376

Query: 301 SLGNLFEHASLALTEEGFLHIFPQMY----DCEGFFVAKIRK 338
            + ++       +TEEG L + P  +      +GF++A++RK
Sbjct: 377 RIRDIAGIDPDWITEEGGLRLRPDYWADLGGMDGFYMAELRK 418