Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., sun protein (RefSeq) from Shewanella loihica PV-4

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 14/193 (7%)

Query: 149 VLDMAAAPGSKTTQMAALMDNQGV--LVANEFSASRVKVLHANIERCGIRNTALSNFDGC 206
           +LD  AAPG K+     L+++Q    LVA +F A R++ +  N++R  ++   +      
Sbjct: 245 ILDACAAPGGKSCH---LLESQPSIDLVAVDFDAKRLERVQQNLDRLSLKAKLVHGDAAK 301

Query: 207 VFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKV 266
           +   W  ++FD +L+DAPCS  G IR+ PD         I+ +A  Q  +++  +Q LK 
Sbjct: 302 IDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELATLQSQILDHCWQWLKP 361

Query: 267 GGTLVYSTCTLSREEN-QQVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQM 325
           GGTL+Y+TC++  +EN +Q+   L +T            L   A    +++    I P  
Sbjct: 362 GGTLLYATCSILPQENAEQIAAFLARTQD--------ATLIPIAQQQNSDDIGWQITPGQ 413

Query: 326 YDCEGFFVAKIRK 338
            + +GF+ A++ K
Sbjct: 414 DNMDGFYYARLVK 426