Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 9e-18
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 18/194 (9%)

Query: 151 DMAAAPGSKTTQMAALMDNQ-----GVLVANEFSASRVKVLHANIERCGIRNTALSNFDG 205
           D  +  G K+ Q+ +LM  Q     G +VA++     ++ L    +R G    +   +  
Sbjct: 287 DACSGAGGKSLQLRSLMLQQDSEASGSVVASDIRRKPLEELTKRAKRAGFSQISTQPWQS 346

Query: 206 C---VFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQ 262
               V  G+    FD VL+DAPCS  GT R++PD        +I   A+ Q  ++  A +
Sbjct: 347 DALPVAAGY----FDGVLVDAPCSCTGTWRRNPDMRWLDDASAITDKASLQLDILSRACE 402

Query: 263 ALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIF 322
           A++ GG LVY+TC++S  ENQ+V         D  S ++L + F +    +     L + 
Sbjct: 403 AVRPGGVLVYATCSISPVENQEVVEAFLAKRPD-FSLQTLTHPFTNEVTQM-----LTVL 456

Query: 323 PQMYDCEGFFVAKI 336
           P   D +G FVAK+
Sbjct: 457 PYQADSDGMFVAKM 470