Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Fmu (Sun) domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 60  AACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTAE 119
           AA  +  ++ +RVN LK +  +  +R A++  +   VP   +   + +D +L     T  
Sbjct: 157 AALAQAPKRYLRVNPLKTNSEDLAKRLAKEGVETREVPGVPSALEVISDAALF---RTEC 213

Query: 120 HMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFS 179
              GLF  Q+A S    +A+  G      V+D  A  G KT  +AA M  +G L+A +  
Sbjct: 214 FKQGLFEQQDAGSQHVAAAV--GAEPGMRVIDACAGAGGKTLAIAAQMQGKGRLLAMDVE 271

Query: 180 ASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMK 239
             ++  L     R G  N              L    D VL+D PCSG G ++++PDA  
Sbjct: 272 QWKLDNLKQRARRAGAHNVETRIIASSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKW 331

Query: 240 NWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQ 284
             + + +  +   Q+ +++S  + +KV G L+Y+TC++  +EN+Q
Sbjct: 332 RDTPDRLPVLVELQREILQSYSRMVKVDGILIYATCSIMPQENRQ 376