Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., tRNA/rRNA cytosine-C5-methylase from Dechlorosoma suillum PS

 Score =  108 bits (269), Expect = 5e-28
 Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 15/290 (5%)

Query: 59  IAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTA 118
           +AA  RP    +RVN+LK        + A+     TP P+   G  +    +L       
Sbjct: 159 VAALNRPAPLDLRVNSLKAERNAVAAQLAKDGIAATPTPYSPLGLRLAGKPAL---SRNP 215

Query: 119 EHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEF 178
             M G   +Q+  S +    L +     + V D  A  G KT  + ALM + G L A + 
Sbjct: 216 LFMDGAVEVQDEGSQL--LGLLLAPKRGEMVADFCAGAGGKTLLLGALMRSTGRLYAFDV 273

Query: 179 SASRVKVLHANIERCGIRNT----ALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKD 234
           S  R+  L   + R G+ N       S  D  +    L  + D VL+DAPCSG GT+R++
Sbjct: 274 SEKRLNNLKPRLARSGLSNVHPVRIESENDARIKR--LAGKLDRVLVDAPCSGLGTLRRN 331

Query: 235 PDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYG 294
           PD       +S+  +   Q A++ SA + +K GG LVY+TC+L +EEN  V       + 
Sbjct: 332 PDLKWRQDEKSVAELNAKQTAILNSAARLVKAGGRLVYATCSLLQEENGAVADAFLAAHP 391

Query: 295 DAVSFESLGNL----FEHASLALTEEGFLHIFPQMYDCEGFFVAKIRKLA 340
           D V+      L     E   L     G L + P  +D + FF A   + A
Sbjct: 392 DFVAVPVADILAAQGIELPGLEAMPAGRLALLPHRHDSDAFFAAVFERQA 441