Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., NOL1/NOP2/sun family putative RNA methylase from Methanococcus maripaludis JJ

 Score =  133 bits (334), Expect = 9e-36
 Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 15/271 (5%)

Query: 70  IRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTAEHMAGLFYIQE 129
           IRVNTLKIS  +  +R  EK  +L    + +  F +   +S   +G+T E++ G +++Q 
Sbjct: 7   IRVNTLKISSEDLKKRLEEKGVELEDT-FLDYVFRVA--KSPFSMGSTPEYLLGYYFLQS 63

Query: 130 ASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHAN 189
            SS++P  ++ +  +  D VLDM AAPG KTT +A LM+N+G ++A E + +R+K L +N
Sbjct: 64  ISSIIP--SITLNPSKDDDVLDMCAAPGGKTTHLAQLMENEGSILAVEINKNRLKSLRSN 121

Query: 190 IERCGIRNTALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSI 249
           I R G +NT + N +       L  RF+ +L+DAPC+G     KD + +K  +   I   
Sbjct: 122 INRMGFKNTLMINTNAVNLDKKL--RFNKILLDAPCTGNEI--KDNNRVK--TKRDILFC 175

Query: 250 ANTQKALIESAFQALKVGGTLVYSTCTLSREENQQVCWHLKQTYGDAVSFESLGNLFEHA 309
           A  Q  L  +A + LK GG LVYSTC+   EE++ +  ++ +T  +    E   + F   
Sbjct: 176 AKRQVELFRTAIEVLKDGGELVYSTCSPEIEEDEDIVRYILKTNKNMELIELTVDDFPGI 235

Query: 310 SLALTE-EGFLHIFPQMYDCEGFFVAKIRKL 339
           ++   E +G L + P     E FF+AK RK+
Sbjct: 236 NMIEGEVKGTLKVIPPN---EPFFIAKFRKV 263