Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 7e-24
 Identities = 59/191 (30%), Positives = 104/191 (54%), Gaps = 10/191 (5%)

Query: 149 VLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVF 208
           +LD  AAPG K+  +  L +    L+A +F A R++ +  N++R  ++   +      + 
Sbjct: 244 ILDACAAPGGKSCHLLEL-EPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANID 302

Query: 209 GGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGG 268
             W  E+FD +L+DAPCS  G IR+ PD         I+ +A  Q+ +++  ++ LK GG
Sbjct: 303 SWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGG 362

Query: 269 TLVYSTCTLSREENQ-QVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYD 327
           TL+Y+TC++  +EN+ Q+   L +T  DA     L  L + AS   +++    I P  ++
Sbjct: 363 TLLYATCSILPQENRDQISAFLART-ADA----KLDTLVQQAS---SQDIGWQITPGQHN 414

Query: 328 CEGFFVAKIRK 338
            +GF+ A++ K
Sbjct: 415 MDGFYYARLLK 425