Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Klebsiella michiganensis M5al

 Score =  534 bits (1376), Expect = e-156
 Identities = 267/471 (56%), Positives = 342/471 (72%), Gaps = 5/471 (1%)

Query: 35  ISLPEPFIASMAKILPDPTQLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLT 94
           + LPE F+A M   +P      DFIAACQRPLR+SIRVNTLKI+VA+F Q  A   WQLT
Sbjct: 20  VYLPEEFLAQMRSAMPTHLSFDDFIAACQRPLRRSIRVNTLKITVADFLQLVAPYRWQLT 79

Query: 95  PVPWCENGFWIDA-DESLVPLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMA 153
           PVPWCE GFWI+  DE  +PLG+TAEH++GLFYIQEASSM+PV+ALF        ++D+A
Sbjct: 80  PVPWCEEGFWIEREDEDDLPLGSTAEHLSGLFYIQEASSMLPVAALFADGETPQRLMDVA 139

Query: 154 AAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLP 213
           AAPGSKTTQ+AA M N+G ++ANE+SASRVKVLHANI RCGI N AL++FDG VFG  LP
Sbjct: 140 AAPGSKTTQIAARMGNEGGILANEYSASRVKVLHANISRCGISNVALTHFDGRVFGAALP 199

Query: 214 ERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYS 273
           E FDA+L+DAPCSGEG +RKDPDA+KNWS ES   IA TQ+ LI+SAF AL+ GG LVYS
Sbjct: 200 ECFDAILLDAPCSGEGVVRKDPDALKNWSPESNAEIALTQRELIDSAFHALRPGGMLVYS 259

Query: 274 TCTLSREENQQVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFFV 333
           TCTL+R+EN++V   L   Y  AV    LG+LF  AS ALT+EGFLH+FPQ++DCEGFFV
Sbjct: 260 TCTLNRQENEEVVNGLLARYPQAVQVLPLGSLFPQASEALTDEGFLHVFPQIFDCEGFFV 319

Query: 334 AKIRKLASV-PTPEVNKRLGKFPFNKASHKQQAEIAQQLHKSLGIELPSDAQVWLRDNDV 392
           A++RK A++ P P    ++GKFPF     ++ A +      ++G++  ++  +W RD ++
Sbjct: 320 ARLRKTAAIEPLPAPGYKVGKFPFTPLKTRESAAVIAAA-AAVGLQWSAEHTLWQRDKEI 378

Query: 393 WLFPEALEPLLGELRFSRMGIKIAEAHKSGYRWQHQVATCLASSSASHSVELDTTQAREW 452
           WLFP+ALE L G++RFSR+GI++AE H  GYRWQH+    LA+ +A  +  L   +A EW
Sbjct: 379 WLFPQALEALFGKVRFSRIGIRLAETHNKGYRWQHEAVIALAAPAAPFA--LTQAEAEEW 436

Query: 453 FMGRDVRPEGQSGQGEVIIRYANDVIGLGKWVGNRVKNGLPRELVRDKNLF 503
           + GRDV PE    + + I+ Y    +GL K VG+R+KN  PRELVRD  LF
Sbjct: 437 YRGRDVYPETLPEKDDAIVTYQGAPLGLAKKVGSRLKNSYPRELVRDGKLF 487