Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Ribosomal RNA small subunit methyltransferase F from Enterobacter sp. TBS_079

 Score =  535 bits (1379), Expect = e-156
 Identities = 265/461 (57%), Positives = 335/461 (72%), Gaps = 5/461 (1%)

Query: 45  MAKILPDPTQLADFIAACQRPLRKSIRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFW 104
           M + LP    L DFIAACQRPLR+SIRVNTLKISVA+F    +   WQLTPVPWC  GFW
Sbjct: 1   MREALPSHLSLDDFIAACQRPLRRSIRVNTLKISVADFLALVSPYNWQLTPVPWCAEGFW 60

Query: 105 IDAD-ESLVPLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQM 163
           I+ D E+ +PLG+TAEH++GLFYIQEASSM+PV+ALF  +   + V+D+AAAPGSKTTQ+
Sbjct: 61  IERDDEASLPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPERVMDVAAAPGSKTTQI 120

Query: 164 AALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPERFDAVLIDA 223
           AA M N+G ++ANEFSASRVKVLHANI RCGI N AL++FDG VFG  LPE FDA+L+DA
Sbjct: 121 AARMGNRGAILANEFSASRVKVLHANISRCGIHNVALTHFDGRVFGAALPEAFDAILLDA 180

Query: 224 PCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ 283
           PCSGEG +RKDPDA+KNWS+ES   IA TQ+ LI+SAF AL+ GGTLVYSTCTL+R+EN+
Sbjct: 181 PCSGEGVVRKDPDALKNWSVESNLEIAATQRELIDSAFHALRPGGTLVYSTCTLNRDENE 240

Query: 284 QVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRKLASV- 342
            VC  LK  Y DAV F  L  LF  A+ A+T EGFLH+FPQ+YDCEGFFVA++RK  +V 
Sbjct: 241 DVCLWLKAQYPDAVEFLPLNGLFASANEAVTPEGFLHVFPQIYDCEGFFVARLRKTQAVE 300

Query: 343 PTPEVNKRLGKFPFNKASHKQQAEIAQQLHKSLGIELPSDAQVWLRDNDVWLFPEALEPL 402
           P P    ++G FPF     ++  ++     K +G+       +W+RD ++WLFP  +EPL
Sbjct: 301 PLPAPTFKVGNFPFAPMKRREAEQVTTAAAK-VGLAWDETCHLWIRDKEIWLFPANIEPL 359

Query: 403 LGELRFSRMGIKIAEAHKSGYRWQHQVATCLASSSASHSVELDTTQAREWFMGRDVRPEG 462
           +G++RFSR+GI++AE H  GYRWQH+    LA S   ++  L   +A EW+ GRDV P+ 
Sbjct: 360 IGKVRFSRIGIRLAEVHNKGYRWQHEAVIALAGS--ENTFALTHQEAEEWYRGRDVYPDN 417

Query: 463 QSGQGEVIIRYANDVIGLGKWVGNRVKNGLPRELVRDKNLF 503
                EV++ Y    +GL K VG+R+KN  PRELVRD  LF
Sbjct: 418 TPPHDEVVVTYQGYPLGLAKKVGSRLKNSYPRELVRDGRLF 458