Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., NOL1/NOP2/sun family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  130 bits (327), Expect = 9e-35
 Identities = 104/314 (33%), Positives = 155/314 (49%), Gaps = 14/314 (4%)

Query: 113 PLGNTAEHMAGLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGV 172
           PLG +     GL YIQ+ SSM+P  AL    A   +VLDM A+PGSKT  +A L+   G 
Sbjct: 51  PLGGSLAAFFGLIYIQDRSSMLPPVAL--APAAGSAVLDMCASPGSKTGFLAQLVGETGF 108

Query: 173 LVANEFSASRVKVLHANIERCGIRNTALSNFDGCVFGGWLPE-RFDAVLIDAPCSGEGTI 231
           ++ NE + SR+  L  N+    + + A  ++ G      LPE  +D + +D PCSG GT+
Sbjct: 109 VLGNEPNRSRLATLRQNLFTLNLLHAATCSYPGESLP--LPEGTWDCIQLDPPCSGWGTV 166

Query: 232 RKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ-QVCWHLK 290
            ++P  +K W  + I+ +   Q+ L+  A + L+ GG +VYSTCT + +EN+ QV + + 
Sbjct: 167 ERNPQVLKLWQGDKIRPLIALQRLLLAEARRLLRPGGRVVYSTCTTNVDENEAQVRYAID 226

Query: 291 QTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRKLASVPTPEVNKR 350
           +   + V  E        A      EG L + PQ    +GFFVA  R+    P  +V   
Sbjct: 227 ELGFEPVPLEPPPGFVFAAPELPGCEGVLRVDPQGSAAQGFFVAAFRR----PGDDVPVA 282

Query: 351 LGKFPFNKASHKQQAEIAQQLHKSLGIELPSDAQVWLRDNDVWLFPEALEPLLGELRFSR 410
              F   KA+    AE+A  +   L   LP        D   +L  +ALE L    R+  
Sbjct: 283 SSPFTPLKATPLHSAELA--MPGVLPALLPEGQVSIFGDTAHFLPRQALERLPESFRW-- 338

Query: 411 MGIKIAEAHKSGYR 424
            G  + +A K+G R
Sbjct: 339 QGCAVGKASKAGLR 352