Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., tRNA/rRNA methyltransferase from Caulobacter crescentus NA1000

 Score =  100 bits (248), Expect = 1e-25
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 15/279 (5%)

Query: 70  IRVNTLKISVAEFCQRAAEKEWQLTPVPWCENGFWIDADESLVPLGNTAEHMA---GLFY 126
           +RVNTLK  V E C +A        P       F I A  +     +     A   G F 
Sbjct: 157 LRVNTLKTDV-ERCAKALALI-DAAPAGVLATAFRIPAPAAADRTPSVEAVPAFSKGWFE 214

Query: 127 IQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVL 186
           +Q+  S   ++A   G+     VLD  A  G KT  +AA M N G + A++  A R+   
Sbjct: 215 VQDLGSQ--IAAAVAGDVKGKQVLDFCAGGGGKTLALAAAMGNSGQIFAHDSDARRLADT 272

Query: 187 HANIERCGIRNTAL-SNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLES 245
               +R G+RN  + S  +     G L  + D V +DAPC+G GT R+ PDA    S + 
Sbjct: 273 IRRGQRAGVRNLQIRSPIEATPLKG-LEGKIDVVFVDAPCTGAGTWRRHPDAKWRLSPDQ 331

Query: 246 IQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ-QVCWHLKQTYGDAVSFESLGN 304
           +      Q +++E A   +K GG ++Y TC+L  EEN+ +V   L++     V   +L  
Sbjct: 332 LAKRQIEQDSVLEDAAAFVKAGGRMIYVTCSLLTEENEDRVAAFLERHPEFTVKPIALDG 391

Query: 305 LFEHASLALTEEGFLHIFPQMYDCEGFFVAKIRKLASVP 343
           +       +T EG+L + P     +GFF A +++ +  P
Sbjct: 392 VTH-----VTPEGYLRLTPHRAGTDGFFAAVLQRASYTP 425