Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., 16S rRNA m5C methyltransferase RsmB from Caulobacter crescentus NA1000

 Score =  102 bits (254), Expect = 3e-26
 Identities = 80/224 (35%), Positives = 118/224 (52%), Gaps = 17/224 (7%)

Query: 123 GLFYIQEASSMMPVSALFMGNAHYDSVLDMAAAPGSKTTQMAALMDNQGVLVANEFSASR 182
           G +++Q+A++ +P   L +      SVLD+ AAPG KT Q+AA       +VA + SA+R
Sbjct: 216 GTWWVQDAAAAVPARLLDVQPGA--SVLDLCAAPGGKTLQLAAA---GAQVVALDRSAAR 270

Query: 183 VKVLHANIERCGIRNTALSNFDGCVFGGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWS 242
           +K L  N+ R G+ +  +   D  V+       FDA+L+DAPCS  GT R+ PD +    
Sbjct: 271 LKRLSENLTRTGL-SAEIVAADAAVWDD--TRTFDAILLDAPCSATGTFRRHPDVLWAAR 327

Query: 243 LESIQSIANTQKALIESAFQALKVGGTLVYSTCTLSREENQ-QVCWHLKQTYGDAV---- 297
              + S+AN Q  ++++A   LK G  LVY  C+L  EE + QV   L +    A+    
Sbjct: 328 PGDVASLANVQARILDAAADRLKPGARLVYCVCSLEPEEGEAQVEAFLARRQDVALEPIT 387

Query: 298 SFESLGNLFEHASLALTEEGFLHIFPQMYD--CEGFFVAKIRKL 339
           + E+    F  AS  LT  G L + P   D   +GFF A+ RKL
Sbjct: 388 AAEAPSAGFPEAS--LTPRGTLRLLPHHRDDGQDGFFAARFRKL 429