Pairwise Alignments

Query, 503 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., sun protein (RefSeq) from Shewanella sp. ANA-3

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 10/191 (5%)

Query: 149 VLDMAAAPGSKTTQMAALMDNQGVLVANEFSASRVKVLHANIERCGIRNTALSNFDGCVF 208
           VLD  AAPG K+  +  L +    LVA +F A R++ +  N++R  ++   +      + 
Sbjct: 245 VLDACAAPGGKSCHLLEL-EPSIQLVAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANID 303

Query: 209 GGWLPERFDAVLIDAPCSGEGTIRKDPDAMKNWSLESIQSIANTQKALIESAFQALKVGG 268
             W  E+FD +L+DAPCS  G IR+ PD         I+ +A  Q+ +++  ++ LK GG
Sbjct: 304 SWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGG 363

Query: 269 TLVYSTCTLSREENQ-QVCWHLKQTYGDAVSFESLGNLFEHASLALTEEGFLHIFPQMYD 327
           TL+Y+TC++  +EN+ Q+   L +T  DA     L  L + AS   +++    I P  ++
Sbjct: 364 TLLYATCSILPQENRDQISAFLART-ADA----KLDTLAQQAS---SQDIGWQITPGQHN 415

Query: 328 CEGFFVAKIRK 338
            +GF+ A++ K
Sbjct: 416 MDGFYYARLLK 426