Pairwise Alignments

Query, 879 a.a., MCE family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 874 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  499 bits (1284), Expect = e-145
 Identities = 287/875 (32%), Positives = 487/875 (55%), Gaps = 28/875 (3%)

Query: 12  TPEIRKRRGISPLWILPIVTMILAGWLVFKAVHDAGVRIQIHFENAQGLIAGRTTIRYQG 71
           TP++ K++  SP+W+LP++ + L  WL  K++ ++GV ++IHF +A G+  G+T +RYQG
Sbjct: 6   TPKVVKKKLFSPIWLLPLIALALGAWLGIKSIRESGVEVRIHFPSATGIDVGKTLVRYQG 65

Query: 72  LEVGMVRDIKLSEGLDSIYVEADIYPEATKLLSNQTRFWMVKPTASLSGVSGLDALVSGN 131
           L VG V DI + + L  +YV+  +   +T  L ++T+FW+V P AS++GV GLDAL SGN
Sbjct: 66  LTVGKVVDISIDDQLQGVYVDLLMDYRSTPFLRDETKFWLVTPKASITGVEGLDALFSGN 125

Query: 132 YIAIQPGSTHQEDYPTQYQALDSAPSDLLAQRGLTISLKARDLGGISVGSQIVYKKIPIG 191
           YIAIQPG   + DY  ++ A D AP       GL I L +  LG + VGSQ+ Y++IP+G
Sbjct: 126 YIAIQPG---EGDYKNEFTAEDQAPPVAPGSDGLMIELTSASLGSLDVGSQVFYRQIPVG 182

Query: 192 EVFSYQLDDDAQSVIIQASIKEEYQHIINTESRFWNVSGIGASIGFEGVDVRLESLSALI 251
           ++ SY+L +D  S++  A I+++Y H++  +SRFWNVSG+       G+ V+ ESLSA++
Sbjct: 183 KIVSYRLVND-DSILFNAYIEKKYSHLVKQDSRFWNVSGLALDASLSGIKVKTESLSAIL 241

Query: 252 GGSIAVDSPDEGKPVEQNAQFRLYRDLKTAGRGIAVSITLPDDNNISASGAPIMYRGIEI 311
            G ++  S    +    N  F ++ D + A  GI  S+T  D +++S +GA I+YRGI I
Sbjct: 242 AGGVSFSSQGSSEQASVNQTFTIFEDKEHALGGITFSLTANDADSLS-TGADIVYRGISI 300

Query: 312 GQITDLQLTENRKSIVASAAIQPAFSDMLNQGSQFVLEEAQVSLTGVENLTNLVKGNYLT 371
           GQIT   LTE   S  AS A Q  ++++L + SQF LE A +SL+G+++ + LV GN + 
Sbjct: 301 GQITQTHLTEAGVSFDASIATQ--YAELLGKDSQFWLEGADLSLSGIKHASRLVTGNVVA 358

Query: 372 LIPGAGERTRNFQAVRKNEFKYARSNSISFNLVADNSFGLEAGTPILYRGVAVGSVTAVN 431
            +PG+GE   ++  + K          +  +L A+ + G+ AG  + ++ + +G V +V 
Sbjct: 359 FLPGSGEHQTSYPLLAK--APQHSQTPLMLSLSAEENPGISAGAEVRFKQLPIGQVDSVE 416

Query: 432 LKLDY--VEFNVLIDEQYGALIRSQNRFYVTGSAAAELTESGLSVSIPPAKQLLLGSISF 489
            K DY  + + + I  ++  LI   + F    + A + +  G+SV+      L  G+IS 
Sbjct: 417 FKPDYSGLAYRIQIWPEFAKLIHQGSYFVAESALAIDASLDGVSVNTRDLTTLTKGAISL 476

Query: 490 A---SEGSSTPLEQYRLYSSQSLAE--LAKYNQSGSRSLTLFAHELPSINAGSPLLYRNL 544
               S+ ++ P +   L+++   AE  LAK N+     + L + +   + A SP+ Y+ +
Sbjct: 477 VQGRSKRTANPSQSLPLFANTKQAEGDLAKQNR---LKIVLSSPDGAGLAAHSPIYYKKM 533

Query: 545 KVGSISG--FTLTPKGVQIEATIEKQYQHLLTPDTVFWNRSGVEIKASMDGVDVKAAPLQ 602
           ++G + G  +  + +   IE  I+KQ+  L+ P T+FW    + + AS++GV V  APL+
Sbjct: 534 QIGEVQGVNWRASSEDFAIELGIDKQFASLVKPSTIFWRNGALSVDASLNGVKVDVAPLE 593

Query: 603 TLIRGGIAFDNLPGIENKVGSMWKLYSDYDHARRYGEKITLTALGTLGVKVGTPVQYQGV 662
             ++G ++   L   ++ +G+   LY     AR     I++    +  +    P++YQG 
Sbjct: 594 GALKGSVSLGLLE--QDDIGNQSHLYGSETLARAKATPISIEFDASTRLSSHAPIRYQGH 651

Query: 663 QIGEVFEIIPDFESDFVKLAARIEPQYAPKIAKQNSQFWLSQAKIGLSGIENVQNLL-GQ 721
           QIGEV  +    +   V + A +   YA      ++Q+++  A I LSG+   + L+ G 
Sbjct: 652 QIGEVERVKLSQDLRSVNVDAYLYGDYAVPFLADDAQYFIVDANISLSGVTAAETLITGP 711

Query: 722 SIEVQPGNGESR---FEFELHKEARHGGAGNTYTLQSEKRGSVSVGTPILYRDIEVGKVI 778
            + V PG   ++   F   +           T+TL  +  GSV +GTPI++R I++G+V 
Sbjct: 712 YVSVLPGQSGNQVHDFMGSVESPTLLNQDALTFTLVDDNLGSVKIGTPIIFRGIKIGEVK 771

Query: 779 DVRLGEFADRVITTIRIAPQYTYLLRQNSVFWNVSGLDMSIGI-TGANVKAGTFDSMLRG 837
            V+L     +V  T +IA  Y++L+ Q+S FW++SG+ + +G+ +GA ++ G+ ++++ G
Sbjct: 772 QVQLSTTGTQVEITAQIAKGYSHLVNQSSQFWDLSGIKVDVGLFSGAQIETGSLETIIAG 831

Query: 838 GITFATPEQKQLTPAAPEGHTFYLYPQAQEEWTKW 872
           GI  AT           +   F L  +    W KW
Sbjct: 832 GIGVATQSPTTANNRIGQDQVFSLQSKLDPNWLKW 866