Pairwise Alignments

Query, 419 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 161 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 5/152 (3%)

Query: 64  LALAVTCLLLFIPSHFFSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAP 123
           LAL +T L+ + P++FF  ++I   G +   T+ QG FA++D+GY  + + VL  + + P
Sbjct: 2   LALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGP 61

Query: 124 LVLCLSVVSAHLALRFRY-----FQTLRYSLLFIHHLKVWVMIDVFLVSVAVSCFKLKDY 178
            +L LS++   L +++         +L+  L F   L    M++++++S  VS F+L D+
Sbjct: 62  GLLILSILIQLLIVKWGLDSPLGRHSLKQLLKFQGLLSQLTMLEIYVISFLVSSFQLSDF 121

Query: 179 SDIFIGPGLLGLVLLQLFTVLLLSRISTRRYW 210
           SDI+ G G     +L L T+ L         W
Sbjct: 122 SDIYFGMGTFCFTMLFLVTLFLQREYDIEHMW 153



 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 261 AYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVASLVKNGMWGIALIIFVASIVVPV 320
           A  + A V  FPAN  P+  +   G     T+F G  ++   G W + + +  A++V P 
Sbjct: 3   ALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGPG 62

Query: 321 IKIIGLAYLLMAIK------LKRHVHQRQRMMIYRGIKWIGKWSVMDLFVISIMLTLVDR 374
           + I+ +   L+ +K      L R  H  ++++ ++G+  + + ++++++VIS +++    
Sbjct: 63  LLILSILIQLLIVKWGLDSPLGR--HSLKQLLKFQGL--LSQLTMLEIYVISFLVSSFQL 118

Query: 375 GQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLW 409
               D   G G   F M+ ++T+      D   +W
Sbjct: 119 SDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMW 153