Pairwise Alignments

Query, 419 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., PqiA family integral membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  181 bits (460), Expect = 3e-50
 Identities = 125/423 (29%), Positives = 205/423 (48%), Gaps = 19/423 (4%)

Query: 15  HASQSGQVRLCPGCELPIDAITVDQAHSAHCPRCGTLLYRGGSPSLSGDLALAVTCLLLF 74
           ++   G ++ C  C L          + AHCPRC   L    +       A     L++ 
Sbjct: 6   YSRHDGVLQACEECGLVTPYTEPKPGYRAHCPRCQHGLQSVLATPFQPIWAYGAATLIML 65

Query: 75  IPSHFFSYIDIRLFGVMIPATLPQGVFALWDEGYIALALLVLFCSSIAPLV-LCLSVVSA 133
             S  F ++   + G+   A+L   + ++       LAL++L C  I PL+ +  S++  
Sbjct: 66  GLSLGFPFLSFSVQGLSQKASLWSALISMHYASNSLLALVILLCVVILPLIYISFSMLIY 125

Query: 134 HLALRFRYFQTLRYSLL-----FIHHLKVWVMIDVFLVSVAVSCFKLKDYSDIFIGPGLL 188
             A   +  +T+  S L     ++   + W+M DVFLV + V+  K+   +++  GP   
Sbjct: 126 RQAYLVQQGRTIELSWLKRASKWVFRFESWLMADVFLVGILVAMVKILSLAEVGFGPSFW 185

Query: 189 GLVLLQLFTVLLLSRISTRRYWE--TWQAETEYDLPVKQVHCHNCH--------LSQPEN 238
              +  L  V  +S + +   W+  T +  T Y + V + H    H        L+  + 
Sbjct: 186 AFCIYTLLLVKFVSLVDSSWVWDKLTPRVATPY-VSVGESHLQQNHGVCPICGQLNAIDA 244

Query: 239 GHCVRCQHKLYHRKP-NSIERTWAYVLAATVAIFPANLIPISILITNGQRLEDTIFSGVA 297
             C RC   ++   P NS++  WA++LAATV   PAN  PI    + GQ    TI SGV 
Sbjct: 245 TECSRCAGAVHKYLPANSMQAAWAFLLAATVFYIPANFYPIMYTTSVGQTEASTIISGVV 304

Query: 298 SLVKNGMWGIALIIFVASIVVPVIKIIGLAYLL-MAIKLKRHVHQRQRMMIYRGIKWIGK 356
            L   G + +A IIF ASIV+P  KI  LAYL   A K        +   +YR  ++IG+
Sbjct: 305 LLWHLGSYPVASIIFFASIVIPTAKIASLAYLFRQAGKAHSSDQAIKNQQLYRVTEFIGR 364

Query: 357 WSVMDLFVISIMLTLVDRGQILDFTPGYGAVAFGMVVVLTMLAAESLDPRLLWDEPDSTR 416
           WS++D+FV++++  LV   +++   PG  A++F MVV+LTML+A + D R+LW +  +T 
Sbjct: 365 WSMIDIFVVALLTALVQLDELMAIKPGPAALSFAMVVILTMLSAIAFDSRVLWRQSSTTN 424

Query: 417 TQQ 419
            ++
Sbjct: 425 CEK 427