Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

 Score =  622 bits (1604), Expect = 0.0
 Identities = 319/577 (55%), Positives = 420/577 (72%), Gaps = 1/577 (0%)

Query: 31  KHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQTATGY 90
           KH+  L  AN +AV+ATL SVPIPLL+PL+VDEVLL H    ++VMNQ LP GWQ A GY
Sbjct: 28  KHKKALWIANGVAVLATLCSVPIPLLLPLLVDEVLLGHGDTALKVMNQALPMGWQRAAGY 87

Query: 91  IMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGG 150
           I L LL+ + +R  + L N++Q+R F  ++K I Y +R ++IE+L RIS+ +YE+ GSG 
Sbjct: 88  IGLMLLVTLALRCGALLFNVVQARLFARLAKDIVYRIRIRLIERLKRISLGEYESLGSGT 147

Query: 151 INAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSR 210
           + AHL+TD++T+D+FIG TLS+FL+++LT++GTA +L+W+ W L L ILL NP+VIY + 
Sbjct: 148 VAAHLVTDLDTLDKFIGETLSRFLVAMLTLVGTAGILVWMHWELALLILLFNPLVIYATV 207

Query: 211 MLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADK 270
            LG +VKHLKK EN +  RF   L ETLD I ++RA N++  FL RL   A  VR+ A  
Sbjct: 208 QLGKRVKHLKKLENDSTSRFTQALTETLDAIQEVRAGNRQGYFLGRLGMRAKEVRDYAVS 267

Query: 271 YAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWFMLSPVQELLG 330
             W+++A+ R S LLF  G ++FRA AML VVFSDL+IGQ+ AVF YLWFM+ PV++LL 
Sbjct: 268 SQWKTDASNRASGLLFQFGIDIFRAAAMLTVVFSDLSIGQMLAVFSYLWFMIGPVEQLLN 327

Query: 331 IQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSYDGESQVLND 390
           +Q+++YAA  AL RIN LL   +E +    V+PF     V IEI  + F Y GE  VLN 
Sbjct: 328 LQYAFYAAGGALNRINELLARADEPQYTGVVDPFKGRDTVGIEIQGLSFGY-GEELVLNQ 386

Query: 391 LSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAV 450
           L+L I  G+KVA+VGASGGGKSTL+QLL+G+Y  QSG+IRF G    +I  + IR+ +AV
Sbjct: 387 LNLSISPGEKVAIVGASGGGKSTLVQLLLGLYTPQSGSIRFGGATQQEIGLETIRENVAV 446

Query: 451 VLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSG 510
           VLQ P LFNDT+R NL +G + SDD  W+AL+IAQL   +  L QGLES +GR+G+RLSG
Sbjct: 447 VLQHPALFNDTVRANLAMGRECSDDDCWRALEIAQLDATVRALPQGLESVVGRSGVRLSG 506

Query: 511 GQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVK 570
           GQRQRLAIARMVL++P+ VILDEATSALD ATE  LH AL++FL  RTTLI+AHRLSAVK
Sbjct: 507 GQRQRLAIARMVLADPRVVILDEATSALDAATEYNLHQALARFLSARTTLIIAHRLSAVK 566

Query: 571 QADLIYVLEDGHVSQSGTHHELLEQEGLYQTLYGSVQ 607
           QAD + V + G +++ G H +L+ + GLY  LYG +Q
Sbjct: 567 QADRVLVFDGGQIAEDGDHLQLIAEGGLYARLYGHLQ 603