Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC-type multidrug transport system, ATPase and permease components from Pseudomonas stutzeri RCH2

 Score =  603 bits (1556), Expect = e-177
 Identities = 306/576 (53%), Positives = 417/576 (72%), Gaps = 1/576 (0%)

Query: 32  HRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVMNQFLPQGWQTATGYI 91
           HR  L+ AN +AV+ATL SVPIPLL+PL+VDEVLL      ++VM++FLP  W++A GYI
Sbjct: 17  HRKALILANLVAVLATLCSVPIPLLLPLLVDEVLLGAGDTALQVMDRFLPASWESAAGYI 76

Query: 92  MLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLGRISIRQYETRGSGGI 151
            L L + +V+R ++ + N+LQ+R F  +SK I Y +R ++IE+L RI++ +YE+ G G +
Sbjct: 77  GLMLGITLVLRASALVFNVLQARLFARLSKDIVYRIRVRLIERLKRIALAEYESLGGGTV 136

Query: 152 NAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGLFILLVNPIVIYFSRM 211
            AHL+TD+ETID+FIG TLS+ L+++L++IGTA +L+W+ W+L L ILL NP+VI+ +  
Sbjct: 137 AAHLVTDLETIDKFIGDTLSRLLVAVLSIIGTAAILVWMHWQLALLILLFNPLVIFATVQ 196

Query: 212 LGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNRLISDADAVRENADKY 271
           LG +VKHLKK EN +  RF   L ETLD I ++RA N++  FL RL   A  VR+ A   
Sbjct: 197 LGKRVKHLKKLENDSTSRFTQALTETLDAIQEVRAGNRQGFFLGRLGLRAREVRDYAVAS 256

Query: 272 AWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFGYLWFMLSPVQELLGI 331
            W+++A+ R S LLF  G ++FRA AML V+FSDL+IGQ+ AVF YLWFM+ PV++LL +
Sbjct: 257 QWKTDASNRASGLLFQFGIDVFRAAAMLTVLFSDLSIGQMLAVFSYLWFMIGPVEQLLSL 316

Query: 332 QFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINNIHFSYDGESQVLNDL 391
           Q+++YAA  AL RIN LL   +E +     +PF     V IE+  + F+Y  E  VL  L
Sbjct: 317 QYAFYAAGGALGRINQLLARADEPQYPGGRDPFAGQTTVAIEVRGLQFAYQDE-PVLEGL 375

Query: 392 SLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHCDDISFDVIRDQIAVV 451
            L I  G+KVA+VGASGGGKSTL+QLL+G+Y+ Q+G IRF G   ++I    +RD +AVV
Sbjct: 376 DLSIAPGEKVAIVGASGGGKSTLVQLLLGLYQPQAGQIRFGGVPLEEIGLSTVRDNVAVV 435

Query: 452 LQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQGLESQIGRNGIRLSGG 511
           LQ P LFND++R NL +G +  DD  W+AL+IAQL D I +L  GL+S +GR+G+RLSGG
Sbjct: 436 LQHPALFNDSVRANLMMGREREDDACWRALEIAQLADTIRQLPNGLDSIVGRSGVRLSGG 495

Query: 512 QRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHGRTTLIVAHRLSAVKQ 571
           QRQRLA+ARM+L+ PK VILDEATSALD ATE ALH  L++FL GRTTLI+AHRLSAVKQ
Sbjct: 496 QRQRLAVARMILAEPKVVILDEATSALDAATEYALHQGLNRFLQGRTTLIIAHRLSAVKQ 555

Query: 572 ADLIYVLEDGHVSQSGTHHELLEQEGLYQTLYGSVQ 607
           AD + V + G +++ G H +L+ + GLY  LYG +Q
Sbjct: 556 ADRVLVFDGGRIAEDGDHQQLIAEGGLYARLYGHLQ 591