Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ABC transporter, transmembrane region:ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  607 bits (1565), Expect = e-178
 Identities = 307/591 (51%), Positives = 422/591 (71%), Gaps = 1/591 (0%)

Query: 17  NDTISRSWLITQVKKHRAKLLFANFIAVVATLISVPIPLLMPLMVDEVLLNHPAKGVEVM 76
           +D +S + +     +H+  L  AN +AV+ATL SVPIPLL+PL+VDEVLL      ++VM
Sbjct: 17  SDALSWAEIRRLALRHKKSLWLANGVAVLATLCSVPIPLLLPLLVDEVLLGRGDAALKVM 76

Query: 77  NQFLPQGWQTATGYIMLTLLMVVVMRIASQLLNILQSRQFTLVSKTITYEMRRKMIEKLG 136
           +  LP  WQ A GYI L L + +V+R+ + + N+LQ+R F  ++K I Y +R ++IE+L 
Sbjct: 77  DHLLPGNWQKAAGYIGLMLSLTLVLRVGALVFNVLQARLFAGLAKDIVYRIRLRLIERLK 136

Query: 137 RISIRQYETRGSGGINAHLITDIETIDQFIGSTLSKFLISLLTVIGTAIVLLWLEWRLGL 196
           RIS+R+YE+ GSG +  HL+TD++T+D+F+G TLS+ L++ LT+ GTA +L+W+ W+L L
Sbjct: 137 RISLREYESLGSGTVTTHLVTDLDTLDKFVGETLSRLLVATLTLAGTAGILMWMHWKLAL 196

Query: 197 FILLVNPIVIYFSRMLGSQVKHLKKRENQAFERFQNRLVETLDGIYQLRAANKEREFLNR 256
            I+L NP+VI  +  LG +VKHLKK EN +  RF   L ETLD I ++RA N++  FL R
Sbjct: 197 LIMLFNPLVILLTVKLGKRVKHLKKLENDSTSRFTQALSETLDAIQEVRAGNRQGFFLGR 256

Query: 257 LISDADAVRENADKYAWQSEAAGRLSFLLFLLGFELFRAVAMLMVVFSDLTIGQIFAVFG 316
           L   A  VR+ A    W+S+A+GR S LLF  G ++FRA AML V+FSDL+IGQ+ AVF 
Sbjct: 257 LGVRAQEVRDYAINSQWKSDASGRASGLLFQFGIDIFRAAAMLTVLFSDLSIGQMLAVFS 316

Query: 317 YLWFMLSPVQELLGIQFSWYAAKAALKRINSLLELEEEYRPISKVNPFTQLGEVDIEINN 376
           YLWFM++PV++LL +Q+++YAA  AL RIN LL   +E +     +PF     V +E+  
Sbjct: 317 YLWFMMTPVEQLLNLQYAYYAAGGALTRINELLARADEPQYAGGTDPFEGKETVGVEVRG 376

Query: 377 IHFSYDGESQVLNDLSLHIPAGKKVALVGASGGGKSTLIQLLIGVYRAQSGAIRFNGQHC 436
           + F Y GE  VL+ L+L+I  G+KVA+VGASGGGKSTL+QLL+G+Y A++G IRF G   
Sbjct: 377 LTFGY-GEDLVLDQLNLNIAPGEKVAIVGASGGGKSTLVQLLLGLYTARTGVIRFGGVSQ 435

Query: 437 DDISFDVIRDQIAVVLQQPILFNDTLRHNLTLGGQFSDDVLWQALDIAQLQDVITKLDQG 496
            DI  + +R+ +AVVLQ P LFNDT+R NLT+G   SD+  W+AL++AQL   I  L QG
Sbjct: 436 QDIGLETVRENVAVVLQHPALFNDTVRANLTMGRDCSDEACWRALEVAQLDSAIRDLPQG 495

Query: 497 LESQIGRNGIRLSGGQRQRLAIARMVLSNPKFVILDEATSALDTATEAALHLALSKFLHG 556
           L+S +GR+G+R+SGGQRQR+AIARMVLS+PK VILDEATSALD ATE  LH AL++FL  
Sbjct: 496 LDSVVGRSGVRMSGGQRQRMAIARMVLSDPKVVILDEATSALDAATEYNLHQALARFLRS 555

Query: 557 RTTLIVAHRLSAVKQADLIYVLEDGHVSQSGTHHELLEQEGLYQTLYGSVQ 607
           RTTLI+AHRLSAVKQAD + V + G +++ G H +L+   GLY  LYG +Q
Sbjct: 556 RTTLIIAHRLSAVKQADRVLVFDGGRIAEDGDHQQLIADGGLYAKLYGHLQ 606